RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 OFCC1Q8IZS5 231 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 OR9I1Q8NGQ6 314 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 SETD6Q8TBK2 473 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 C2orf15Q8WU43 125 aaKnown RBP12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 C3orf30Q96M34 536 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 RNF145Q96MT1 663 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 ATOH8Q96SQ7 321 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 KLHL25Q9H0H3 589 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 ADNPQ9H2P0 1102 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 TOR3AQ9H497 397 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 SYNDIG1Q9H7V2 258 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 MID1IP1Q9NPA3 183 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 DIABLOQ9NR28 239 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 TLR8Q9NR97 1041 aaKnown RBP12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 TOR4AQ9NXH8 423 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 CCDC59Q9P031 241 aaKnown RBP12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 SFMBT1Q9UHJ3 866 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 OSGIN1Q9UJX0 560 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 MAFFQ9ULX9 164 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 BTRCQ9Y297 605 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 PCDHGA8Q9Y5G5 932 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 MYO16Q9Y6X6 1858 aa12.51□□□□□ -0.41
CHCHD1-202ENST00000372837 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 H7C4K7 107 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 IDH3BO43837 385 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 RAMP2O60895 175 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 DKK1O94907 266 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 VNN2O95498 520 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 HDCP19113 662 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 EFNA1P20827 205 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 SHMT2P34897 504 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 GJA4P35212 333 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 EIF2S3P41091 472 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 EIF2DP41214 584 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 CD86P42081 329 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 ZFP36L2P47974 494 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 ARHGDIAP52565 204 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 BNC1Q01954 994 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 SELENBP1Q13228 472 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 AQP6Q13520 282 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 PCSK7Q16549 785 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 TYSND1Q2T9J0 566 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 CTXN3Q4LDR2 81 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 SLC39A12Q504Y0 691 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 MS4A13Q5J8X5 152 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 ARTNQ5T4W7 220 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 ALG1LQ6GMV1 187 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 PNCKQ6P2M8 343 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 MSANTD1Q6ZTZ1 278 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 GPR155Q7Z3F1 870 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 PTGR2Q8N8N7 351 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 OR6P1Q8NGX9 317 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 BRSK1Q8TDC3 778 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 FAR1Q8WVX9 515 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 HPS1Q92902 700 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 HMCESQ96FZ2 354 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 ZNF382Q96SR6 550 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 TRAF4Q9BUZ4 470 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 SEMA4CQ9C0C4 833 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 HOXD1Q9GZZ0 328 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 CRISPLD1Q9H336 500 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 TPK1Q9H3S4 243 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 NOL6Q9H6R4 1146 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 KAT8Q9H7Z6 458 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 PCOLCE2Q9UKZ9 415 aa12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 INTS6Q9UL03 887 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 TNPO3Q9Y5L0 923 aaKnown RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
CHCHD1-202ENST00000372837 KNTC1P50748 2209 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 NYNRINQ9P2P1 1898 aaKnown RBP12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 NEMP2A6NFY4 417 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 B8ZZF3 427 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 TLX3O43711 291 aaPredicted RBP12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 CRCPO75575 148 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 NADKO95544 446 aaPredicted RBP12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 KRT6AP02538 564 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 KRT6BP04259 564 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 MTHFD2P13995 350 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 ZNF37AP17032 561 aaPredicted RBP12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 ELK4P28324 431 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 GABRR2P28476 465 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 CHRNA4P43681 627 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 SLC35A2P78381 396 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 CYP4F8P98187 520 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 CD47Q08722 323 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 CDK5R2Q13319 367 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 SERINC3Q13530 473 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 ZNF235Q14590 738 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 ZNF460Q14592 562 aa12.49□□□□□ -0.41
CHCHD1-202ENST00000372837 POLD3Q15054 466 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms