RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 KIRREL2Q6UWL6 708 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 CERS2Q96G23 380 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 MFRPQ9BY79 579 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 TGIF2Q9GZN2 237 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 DRC3Q9H069 523 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
TMEM53-201ENST00000372235 SAR1BQ9Y6B6 198 aa18■□□□□ 0.47
TMEM53-201ENST00000372235 ASH1LQ9NR48 2969 aaKnown RBP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 KCNE1BA0A087WTH5 132 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 KRT87PA6NCN2 255 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 CYC1P08574 325 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 IMPA1P29218 277 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 IL2P60568 153 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 GNG11P61952 73 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 KLC1Q07866 573 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 PDAP1Q13442 181 aaKnown RBP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 FRG1Q14331 258 aaKnown RBP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 BBS9Q3SYG4 887 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 AGGF1Q8N302 714 aaeCLIP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 PPFIBP2Q8ND30 876 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 PPP4R1Q8TF05 950 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 ATL1Q8WXF7 558 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 C10orf90Q96M02 699 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 HAUS8Q9BT25 410 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 MAP10Q9P2G4 905 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 C3orf18Q9UK00 162 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 RUVBL1Q9Y265 456 aaKnown RBP17.99■□□□□ 0.47
TMEM53-201ENST00000372235 FER1L5A0AVI2 2057 aa17.99■□□□□ 0.47
TMEM53-201ENST00000372235 MED13Q9UHV7 2174 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 PCM1Q15154 2024 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 IGKV1-8A0A0C4DH67 115 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 H0YIG0 161 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 ICAM2P13598 275 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 SLC26A3P40879 764 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 AP1S2P56377 157 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 ARL4CP56559 192 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 HIF1AQ16665 826 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 KCTD19Q17RG1 926 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 FAM45BPQ6NSW5 357 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 Q6ZS92 163 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 PIWIL4Q7Z3Z4 852 aaKnown RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 LRRC56Q8IYG6 542 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 TBC1D19Q8N5T2 526 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 METTL27Q8N6F8 245 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 Q8NA96 180 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 CAMKVQ8NCB2 501 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 BBOF1Q8ND07 529 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 OR11G2Q8NGC1 345 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 FAM45AQ8TCE6 357 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 EEF1AKMT1Q8WVE0 214 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 LMF1Q96S06 567 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 NAPGQ99747 312 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 WDR77Q9BQA1 342 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 YIPF2Q9BWQ6 316 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 AGPAT4Q9NRZ5 378 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 CUEDC1Q9NWM3 386 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 STOX2Q9P2F5 926 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 TRPC4Q9UBN4 977 aa17.98■□□□□ 0.47
TMEM53-201ENST00000372235 TNRC6AQ8NDV7 1962 aaKnown RBP17.98■□□□□ 0.47
TMEM53-201ENST00000372235 UBR5O95071 2799 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-201ENST00000372235 H7BY64 318 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 AHSGP02765 367 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 ENO2P09104 434 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-201ENST00000372235 EMP2P54851 167 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 ATG9BQ674R7 924 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 CAPN13Q6MZZ7 669 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-201ENST00000372235 NIPAL1Q6NVV3 410 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 IGFL2Q6UWQ7 119 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 SHISA6Q6ZSJ9 500 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 NDUFAF7Q7L592 441 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 C17orf64Q86WR6 236 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 KBTBD2Q8IY47 623 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 SNF8Q96H20 258 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 PRAP1Q96NZ9 151 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 KCNF1Q9H3M0 494 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 ABCF3Q9NUQ8 709 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 NSMCE4AQ9NXX6 385 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 PDE10AQ9Y233 779 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 VWA7Q9Y334 891 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 ANKRD12Q6UB98 2062 aa17.97■□□□□ 0.47
TMEM53-201ENST00000372235 NSG1A0A0A6YYJ2 146 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 A0A1W2PQ72 361 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 HAT1O14929 419 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 AGFG2O95081 481 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 HEXBP07686 556 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 GNLYP22749 145 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 IVDP26440 423 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 TBPL1P62380 186 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 SKP1P63208 163 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 YBX1P67809 324 aaKnown RBP17.96■□□□□ 0.47
TMEM53-201ENST00000372235 HKDC1Q2TB90 917 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 PLEKHN1Q494U1 663 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-201ENST00000372235 B3GNTL1Q67FW5 361 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-201ENST00000372235 DUPD1Q68J44 220 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 HIBCHQ6NVY1 386 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-201ENST00000372235 AGTRAPQ6RW13 159 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 PAQR3Q6TCH7 311 aa17.96■□□□□ 0.47
TMEM53-201ENST00000372235 LCTLQ6UWM7 567 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms