RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRIM48Q8IWZ4 208 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 LIX1Q8N485 282 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 FAM13CQ8NE31 585 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 OR2A1Q8NGT9 310 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 SPDL1Q96EA4 605 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 TEX37Q96LM6 180 aa25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 DUSP15Q9H1R2 295 aaPredicted RBP25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.33■■□□□ 1.64
ATPAF1-202ENST00000371937 MRASO14807 208 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 ANKRD28O15084 1053 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 BCKDHAP12694 445 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 AMD1P17707 334 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 BCKDHBP21953 392 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 PSMB5P28074 263 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 RAP1GDS1P52306 607 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 VPS26BQ4G0F5 336 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 CYB5D1Q6P9G0 228 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 PGAM4Q8N0Y7 254 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 RNF175Q8N4F7 328 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 APIPQ96GX9 242 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 ZBTB18Q99592 522 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 ADGRE2Q9UHX3 823 aa25.32■■□□□ 1.64
ATPAF1-202ENST00000371937 TRBV23OR9-2A0A075B6M9 112 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 KIR2DS5A0A0G2JLQ3 304 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 A0A0G2JNG1 304 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 A0A1W2PP18 115 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 KIR2DS3K7RE56 304 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 CSF2P04141 144 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 ABATP80404 500 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 MEF2AQ02078 507 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 TBL3Q12788 808 aaKnown RBP25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 KIR2DS5Q14953 304 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 WDR45BQ5MNZ6 344 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 HACD2Q6Y1H2 254 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 TMEFF1Q8IYR6 380 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 ULK2Q8IYT8 1036 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 GLB1L3Q8NCI6 653 aaPredicted RBP25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 OR4K1Q8NGD4 311 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 DNASE2BQ8WZ79 361 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 EDAQ92838 391 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 ACTL8Q9H568 366 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 WDR41Q9HAD4 459 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 POT1Q9NUX5 634 aa25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 PRPF19Q9UMS4 504 aaKnown RBP25.31■■□□□ 1.64
ATPAF1-202ENST00000371937 PDGFBP01127 241 aaPredicted RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 CAPN3P20807 821 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 ACSM2AQ08AH3 577 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 DMWDQ09019 674 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 PRRT3Q5FWE3 981 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 ACSM2BQ68CK6 577 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 C1orf216Q8TAB5 229 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 ROPN1LQ96C74 230 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 FCRL1Q96LA6 429 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 APOLD1Q96LR9 279 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 DPY30Q9C005 99 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 SRMSQ9H3Y6 488 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 NT5DC2Q9H857 520 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 CUEDC1Q9NWM3 386 aaPredicted RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 PPT2Q9UMR5 302 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 RUVBL1Q9Y265 456 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 FANCMQ8IYD8 2048 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 A0A088AWK7 358 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 CCDC154A6NI56 674 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 H7BY64 318 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 PRICKLE3O43900 615 aaPredicted RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 CCNDBP1O95273 360 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 VIPP01282 170 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 NME1P15531 152 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 ZFP36L2P47974 494 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 RPS13P62277 151 aaKnown RBP25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 PTGR1Q14914 329 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 ADNP2Q6IQ32 1131 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 NOXRED1Q6NXP6 359 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 OR4E2Q8NGC2 313 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 PRAP1Q96NZ9 151 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 SPNS1Q9H2V7 528 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 SLC52A3Q9NQ40 469 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 DMRT3Q9NQL9 472 aa25.3■■□□□ 1.64
ATPAF1-202ENST00000371937 C9JVG2 144 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 MYO1DO94832 1006 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 SERPINB1P30740 379 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 YBX1P67809 324 aaKnown RBP25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 RBBP5Q15291 538 aaKnown RBP25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 ELOCQ15369 112 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 SPIN4Q56A73 249 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 LAYNQ6UX15 382 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 ZNF740Q8NDX6 193 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 SLC22A18Q96BI1 424 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 LRRC61Q9BV99 259 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 CPNE7Q9UBL6 633 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 DLGAP4Q9Y2H0 992 aa25.29■■□□□ 1.64
ATPAF1-202ENST00000371937 MGRN1O60291 552 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 IL12AP29459 219 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 REEP5Q00765 189 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 PLCL1Q15111 1095 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 SERPINI1Q99574 410 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 RHBGQ9H310 441 aa25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 MRPS30Q9NP92 439 aaKnown RBP25.28■■□□□ 1.64
ATPAF1-202ENST00000371937 GON4LQ3T8J9 2241 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms