RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 PTRH1Q86Y79 214 aaKnown RBP9.65□□□□□ -0.86
TPM3-210ENST00000368530 TRAM1L1Q8N609 369 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 AGBL5Q8NDL9 886 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 TRPC4APQ8TEL6 797 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 KLHL29Q96CT2 875 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 PANX3Q96QZ0 392 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 ZSCAN5AQ9BUG6 496 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 STN1Q9H668 368 aaKnown RBP9.65□□□□□ -0.86
TPM3-210ENST00000368530 KCTD5Q9NXV2 234 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 AKAP7Q9P0M2 348 aaPredicted RBP9.65□□□□□ -0.86
TPM3-210ENST00000368530 TUBD1Q9UJT1 453 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 ADAMTS6Q9UKP5 1117 aa9.65□□□□□ -0.86
TPM3-210ENST00000368530 PCYT1BQ9Y5K3 369 aaPredicted RBP9.65□□□□□ -0.86
TPM3-210ENST00000368530 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CCDC189A1A4V9 331 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 NKX2-8O15522 239 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 GUCA1CO95843 209 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 SERPINA6P08185 405 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CCR7P32248 378 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CPA2P48052 419 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 POLE2P56282 527 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 KCNJ2P63252 427 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 KCNAB2Q13303 367 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 BOP1Q14137 746 aaKnown RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 RBBP7Q16576 425 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 TTLL9Q3SXZ7 439 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 PYCR3Q53H96 274 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 ANKS6Q68DC2 871 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CLEC6AQ6EIG7 209 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 TRIM74Q86UV6 250 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 TREML1Q86YW5 311 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 AFAP1L2Q8N4X5 818 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 BEND7Q8N7W2 519 aaPredicted RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 SKA2Q8WVK7 121 aaPredicted RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 PDLIM5Q96HC4 596 aaKnown RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 NSL1Q96IY1 281 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 SLC45A3Q96JT2 553 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 MID1IP1Q9NPA3 183 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 SEMA4BQ9NPR2 832 aaPredicted RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 SAR1AQ9NR31 198 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 LATS2Q9NRM7 1088 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 SLC39A1Q9NY26 324 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 NUDT4Q9NZJ9 180 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 VTI1BQ9UEU0 232 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 CDYLQ9Y232 598 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.64□□□□□ -0.87
TPM3-210ENST00000368530 TMEM98Q9Y2Y6 226 aa9.64□□□□□ -0.87
TPM3-210ENST00000368530 ZFC3H1O60293 1989 aaKnown RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 LOC101059948A0A1B0GTJ6 334 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 RGSL1A5PLK6 1076 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 SLCO1B7G3V0H7 640 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 DUX1O43812 170 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 RAD1O60671 282 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ATP5HO75947 161 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 CDK14O94921 469 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 PBLDP30039 288 aaPredicted RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 CSTF2P33240 577 aaKnown RBP eCLIP9.63□□□□□ -0.87
TPM3-210ENST00000368530 CASRP41180 1078 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ACTR1BP42025 376 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 HK2P52789 917 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ACTR1AP61163 376 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 GPLD1P80108 840 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 MC2RQ01718 297 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 CLCQ05315 142 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 BTKQ06187 659 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 HSPA14Q0VDF9 509 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 KRT72Q14CN4 511 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 TGFBIQ15582 683 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 IGFBP7Q16270 282 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 LSM12Q3MHD2 195 aaKnown RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 SPDYAQ5MJ70 313 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 RAET1GQ6H3X3 334 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 SBSNQ6UWP8 590 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ADAMTSL4Q6UY14 1074 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ACAD11Q709F0 780 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ADAMTSL2Q86TH1 951 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ZNF761Q86XN6 746 aaPredicted RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 RAVER1Q8IY67 606 aaKnown RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 NRSN1Q8IZ57 195 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 IL22RA1Q8N6P7 574 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 DDHD1Q8NEL9 900 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 SLC37A2Q8TED4 501 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ELMO1Q92556 727 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 GLYATL1Q969I3 302 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 PTCD3Q96EY7 689 aaKnown RBP9.63□□□□□ -0.87
TPM3-210ENST00000368530 COX14Q96I36 57 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 MARK4Q96L34 752 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 DPYSL5Q9BPU6 564 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 TRMOQ9BU70 441 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 CCDC106Q9BWC9 280 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 ASPSCR1Q9BZE9 553 aa9.63□□□□□ -0.87
TPM3-210ENST00000368530 TCF7L2Q9NQB0 619 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms