RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GOLGA6L6A8MZA4 724 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 E5RI56 91 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 E7ENX8 843 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 PCDH17O14917 1159 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 LRRTM2O43300 516 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 CCNDBP1O95273 360 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 SLC16A8O95907 504 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 SERPINA7P05543 415 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 PAMP19021 973 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 CXCR2P25025 360 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 ABATP80404 500 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 SARNPP82979 210 aaKnown RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 TAP2Q03519 686 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 ZNF324BQ6AW86 544 aaPredicted RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 REXO1L1PQ8IX06 675 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 LRRC56Q8IYG6 542 aaPredicted RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 OR1N1Q8NGS0 311 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 GIMAP7Q8NHV1 300 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 BRIX1Q8TDN6 353 aaKnown RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 HAS2Q92819 552 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 MKKSQ9NPJ1 570 aaPredicted RBP15.22■□□□□ 0.03
CKS1B-202ENST00000368436 LZTFL1Q9NQ48 299 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 MED16Q9Y2X0 877 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 SVILO95425 2214 aa15.22■□□□□ 0.03
CKS1B-202ENST00000368436 GFYI3L273 518 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TXNDC9O14530 226 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 FFAR3O14843 346 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 GPR42O15529 346 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 FOXS1O43638 330 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 CEP104O60308 925 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 BMP10O95393 424 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 STSP08842 583 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 MPC1LP0DKB6 136 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 MLNP12872 115 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TNFSF10P50591 281 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 PER3P56645 1201 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 ARG2P78540 354 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 GPS1Q13098 491 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TSTA3Q13630 321 aaPredicted RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 DHX34Q14147 1143 aaKnown RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 FAM53BQ14153 422 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TRIP13Q15645 432 aaPredicted RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TTLL9Q3SXZ7 439 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 ANKRD22Q5VYY1 191 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 TMEM205Q6UW68 189 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 FAM180AQ6UWF9 173 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 CYHR1Q6ZMK1 362 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 RIPOR1Q6ZS17 1223 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 BCORP1Q8N888 145 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 PPFIBP2Q8ND30 876 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 ASB11Q8WXH4 323 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 RERGQ96A58 199 aaPredicted RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 MMABQ96EY8 250 aaPredicted RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 YIPF2Q9BWQ6 316 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 PTGFRNQ9P2B2 879 aa15.21■□□□□ 0.03
CKS1B-202ENST00000368436 MRPS2Q9Y399 296 aaKnown RBP15.21■□□□□ 0.03
CKS1B-202ENST00000368436 CELSR2Q9HCU4 2923 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 MYO9AB2RTY4 2548 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 A0A0A6YYC8 382 aaPredicted RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 DYTNA2CJ06 578 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 I3L1I5 382 aaPredicted RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 SMAPO00193 183 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 HEXBP07686 556 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ANXA5P08758 320 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 CCDC175P0C221 793 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 CXCR5P32302 372 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 VPS41P49754 854 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 TDGF1P3P51864 188 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 EFNA3P52797 238 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 TERF1P54274 439 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 EEF1A2Q05639 463 aaKnown RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 PCOLCEQ15113 449 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ZRSR2Q15696 482 aaKnown RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 INAQ16352 499 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ZNF470Q6ECI4 717 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 CASC4Q6P4E1 433 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ZNF549Q6P9A3 640 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 TICAM1Q8IUC6 712 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ZC3H7AQ8IWR0 971 aaKnown RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 SLC34A3Q8N130 599 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 MCUQ8NE86 351 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 TRIM58Q8NG06 486 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 KCNJ9Q92806 393 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 EBNA1BP2Q99848 306 aaKnown RBP15.2■□□□□ 0.02
CKS1B-202ENST00000368436 DRC3Q9H069 523 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 ZNF700Q9H0M5 742 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 OLAHQ9NV23 265 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 RIC8BQ9NVN3 520 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 PLA2G3Q9NZ20 509 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 PCYOX1Q9UHG3 505 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 DHRS7Q9Y394 339 aa15.2■□□□□ 0.02
CKS1B-202ENST00000368436 SCN2AQ99250 2005 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 TRAV17A0A0B4J275 112 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 ZCWPW2A0A1B0GU75 182 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 CTAGE9A4FU28 777 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 SDR42E2A6NKP2 422 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 HAT1O14929 419 aa15.19■□□□□ 0.02
CKS1B-202ENST00000368436 P2RX6O15547 441 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms