RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 SPATA7Q9P0W8 599 aa20.39■□□□□ 0.85
PCMT1-201ENST00000367378 TSR3Q9UJK0 312 aaKnown RBP20.39■□□□□ 0.85
PCMT1-201ENST00000367378 TCAF1Q9Y4C2 921 aa20.39■□□□□ 0.85
PCMT1-201ENST00000367378 IGHV3-20A0A0C4DH32 117 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 ERI2A8K979 691 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 FAM227AF5H4B4 570 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 VPS26AO75436 327 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 SEC24DO94855 1032 aaPredicted RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 ANXA5P08758 320 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 CCNFP41002 786 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 NAP1L1P55209 391 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 AP2B1P63010 937 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 MAT1AQ00266 395 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 LONRF1Q17RB8 773 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 AARS2Q5JTZ9 985 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 FCRLBQ6BAA4 426 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 Q6ZPB1 254 aaPredicted RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 OTOAQ7RTW8 1153 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 SPPL2CQ8IUH8 684 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 CCDC170Q8IYT3 715 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 BEST3Q8N1M1 668 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 LRRC57Q8N9N7 239 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 THAP3Q8WTV1 239 aaPredicted RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 MAGED4Q96JG8 741 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 GPR137Q96N19 417 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 SIGLEC12Q96PQ1 595 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 OR2A5Q96R48 311 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 HES7Q9BYE0 225 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 MRPS30Q9NP92 439 aaKnown RBP20.38■□□□□ 0.85
PCMT1-201ENST00000367378 CHRAC1Q9NRG0 131 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 TEKT2Q9UIF3 430 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 GNPTGQ9UJJ9 305 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 ANAPC5Q9UJX4 755 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 MEMO1Q9Y316 297 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 MRFAP1Q9Y605 127 aa20.38■□□□□ 0.85
PCMT1-201ENST00000367378 CD3EAPO15446 510 aaKnown RBP20.37■□□□□ 0.85
PCMT1-201ENST00000367378 ZNHIT1O43257 154 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 C8orf89P0DMQ9 161 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 TTPAP49638 278 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 NAA25Q14CX7 972 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.37■□□□□ 0.85
PCMT1-201ENST00000367378 GARNL3Q5VVW2 1013 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 SPNS3Q6ZMD2 512 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 LANCL3Q6ZV70 420 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 MDS2Q8NDY4 140 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 MRFAP1L1Q96HT8 127 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 FOPNLQ96NB1 174 aa20.37■□□□□ 0.85
PCMT1-201ENST00000367378 GRID2IPA4D2P6 1211 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 KPNA5O15131 536 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 P2RX6O15547 441 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 PHF2O75151 1096 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 MATN4O95460 622 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 ERGP11308 486 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 CAPN3P20807 821 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 CTSL3PQ5NE16 218 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 ACER2Q5QJU3 275 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 ZNF425Q6IV72 752 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 CDH24Q86UP0 819 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 CEP97Q8IW35 865 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 MAGEC3Q8TD91 643 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 ATG4AQ8WYN0 398 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 C14orf79Q96F83 325 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 CALR3Q96L12 384 aaKnown RBP20.36■□□□□ 0.85
PCMT1-201ENST00000367378 VN1R1Q9GZP7 353 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 DRC3Q9H069 523 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 KLHL1Q9NR64 748 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 ANKRD10Q9NXR5 420 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 PACSIN2Q9UNF0 486 aaPredicted RBP20.36■□□□□ 0.85
PCMT1-201ENST00000367378 PCDHGB6Q9Y5F9 930 aa20.36■□□□□ 0.85
PCMT1-201ENST00000367378 NPIPA5E9PKD4 350 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 TTI1O43156 1089 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 RPS3P23396 243 aaKnown RBP eCLIP20.35■□□□□ 0.852e-7■■■■□ 23.3
PCMT1-201ENST00000367378 RPA3P35244 121 aaPredicted RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 CYLC1P35663 651 aaPredicted RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 EIF3BP55884 814 aaKnown RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 ALDH6A1Q02252 535 aaKnown RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 TUBA3CQ13748 450 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 BTBD16Q32M84 506 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 KRTCAP3Q53RY4 240 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 H3F3CQ6NXT2 135 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 TUBA3EQ6PEY2 450 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 CPEB2Q7Z5Q1 589 aaKnown RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 PRUNE1Q86TP1 453 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 OR9A1PQ8NGU1 263 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 SMPDL3AQ92484 453 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 PEX13Q92968 403 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 CYTH2Q99418 400 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 NPAS2Q99743 824 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 LACRTQ9GZZ8 138 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 NPIPA1Q9UND3 350 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 REXO2Q9Y3B8 237 aaKnown RBP20.35■□□□□ 0.85
PCMT1-201ENST00000367378 SCN3AQ9NY46 2000 aa20.35■□□□□ 0.85
PCMT1-201ENST00000367378 ARHGEF33A8MVX0 844 aa20.34■□□□□ 0.85
PCMT1-201ENST00000367378 MAN1A2O60476 641 aa20.34■□□□□ 0.85
PCMT1-201ENST00000367378 FDFT1P37268 417 aa20.34■□□□□ 0.85
PCMT1-201ENST00000367378 CD96P40200 585 aa20.34■□□□□ 0.85
PCMT1-201ENST00000367378 TLE4Q04727 773 aa20.34■□□□□ 0.85
PCMT1-201ENST00000367378 TSTA3Q13630 321 aaPredicted RBP20.34■□□□□ 0.85
PCMT1-201ENST00000367378 GBX1Q14549 363 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms