RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 COX14Q96I36 57 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 LINC00615Q96LM1 132 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 CCM2Q9BSQ5 444 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 NMUR2Q9GZQ4 415 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ACSS2Q9NR19 701 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 MBNL1Q9NR56 388 aaKnown RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 TXLNGQ9NUQ3 528 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 CUEDC1Q9NWM3 386 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 PTBP2Q9UKA9 531 aaKnown RBP10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 VPS4AQ9UN37 437 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 GPR34Q9UPC5 381 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 CDYLQ9Y232 598 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 STK38LQ9Y2H1 464 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 ANKRD12Q6UB98 2062 aa10.88□□□□□ -0.67
CSNK1E-202ENST00000366216 C17orf113A0A1B0GUU1 675 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SLC5A10A0PJK1 596 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 GFYI3L273 518 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 E2F3O00716 465 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 UBFD1O14562 309 aaKnown RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 HGSO14964 777 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 INPP4BO15327 924 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 CAPN5O15484 640 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 MAP3K7O43318 606 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 DIAPH2O60879 1101 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SEMA7AO75326 666 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 DNAJC8O75937 253 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 CDK14O94921 469 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 UNC5CO95185 931 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 CCL4P13236 92 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 VCLP18206 1134 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 COL8A1P27658 744 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 BLKP51451 505 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 CTSCP53634 463 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 YPEL5P62699 121 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SH3BP2P78314 561 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 HSPA14Q0VDF9 509 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 GTF2H3Q13889 308 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 C16orf72Q14CZ0 275 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 WSCD2Q2TBF2 565 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ZNF658BQ4V348 819 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SLC9B1Q4ZJI4 515 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ZNF648Q5T619 568 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TMEM220Q6QAJ8 160 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ACAD11Q709F0 780 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SPRED1Q7Z699 444 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 HEATR4Q86WZ0 1026 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TCAIMQ8N3R3 496 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 UBTD2Q8WUN7 234 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 APOBEC4Q8WW27 367 aaKnown RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ASB11Q8WXH4 323 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ASB12Q8WXK4 309 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 MAELQ96JY0 434 aaKnown RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TAAR9Q96RI9 348 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TRIM54Q9BYV2 358 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SHCBP1LQ9BZQ2 653 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 SEMA6CQ9H3T2 930 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 AKAP7Q9P0M2 348 aaPredicted RBP10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 PCTPQ9UKL6 214 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 ADAMTS6Q9UKP5 1117 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TRIM33Q9UPN9 1127 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TP53TG5Q9Y2B4 290 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 TRAF6Q9Y4K3 522 aa10.87□□□□□ -0.67
CSNK1E-202ENST00000366216 HIVEP1P15822 2718 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 LRRC14BA6NHZ5 514 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 NCF1BA6NI72 391 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 OR2AG2A6NM03 316 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 NCF1CA8MVU1 366 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 CAPN14A8MX76 684 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 GPR89AB7ZAQ6 455 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 K7EM74 188 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 LIN7AO14910 233 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 AZIN1O14977 448 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 NKX2-8O15522 239 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 MATN4O95460 622 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 GPR89BP0CG08 455 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 T-ENOLP0DO92 83 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 PRKAR1AP10644 381 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 CTSEP14091 401 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 NCF1P14598 390 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 PNLIPP16233 465 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 GLB1P16278 677 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 AGTR2P50052 363 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 RASSF2P50749 326 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 CDH13P55290 713 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 PKNOX1P55347 436 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 NCALDP61601 193 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 PLOD1Q02809 727 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 CDC20Q12834 499 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 CDC16Q13042 620 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 BOP1Q14137 746 aaKnown RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 RPS27LQ71UM5 84 aaKnown RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 MAMDC2Q7Z304 686 aaPredicted RBP10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 GKN2Q86XP6 184 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 TEX19Q8NA77 164 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 GALNT11Q8NCW6 608 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
CSNK1E-202ENST00000366216 ACTRT2Q8TDY3 377 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms