RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 GALNT1Q10472 559 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-201ENST00000361716 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-201ENST00000361716 TATDN3Q17R31 274 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 INO80DQ53TQ3 878 aaPredicted RBP12.34□□□□□ -0.43
VAMP1-201ENST00000361716 ZNF621Q6ZSS3 439 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 RASAL3Q86YV0 1011 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 CNTN4Q8IWV2 1026 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 PJA1Q8NG27 643 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 RHBDF1Q96CC6 855 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 BCL7BQ9BQE9 202 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 SYTL2Q9HCH5 934 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 WWOXQ9NZC7 414 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 GRIP1Q9Y3R0 1128 aa12.34□□□□□ -0.43
VAMP1-201ENST00000361716 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TEX46H3BTG2 121 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SLC16A6O15403 523 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 IRAK2O43187 625 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SCELO95171 688 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 AKR1D1P51857 326 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ABI3BPQ7Z7G0 1075 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 LRRTM3Q86VH5 581 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ENTHD1Q8IYW4 607 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SLC34A3Q8N130 599 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 C10orf111Q8N326 155 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 CLDN19Q8N6F1 224 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ASB15Q8WXK1 588 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 GTPBP3Q969Y2 492 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF599Q96NL3 588 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 IL4I1Q96RQ9 567 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 FARSBQ9NSD9 589 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 THUMPD1Q9NXG2 353 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 COMMD3Q9UBI1 195 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 CFL2Q9Y281 166 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ODC1P11926 461 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TNNI3P19429 210 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 WARSP23381 471 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ERP29P30040 261 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 EVI2BP34910 448 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 NRIP1P48552 1158 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ABATP80404 500 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 HTRA3P83110 453 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ABRAXAS2Q15018 415 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 PARP15Q460N3 678 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 DGKKQ5KSL6 1271 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 LINC00299Q6ZSB3 139 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 Q6ZSR9 355 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 GPR65Q8IYL9 337 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ANGPTL6Q8NI99 470 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 AKAP1Q92667 903 aaKnown RBP eCLIP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 C17orf62Q9BQA9 187 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 NFKBIZQ9BYH8 718 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ANKHQ9HCJ1 492 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SLC52A3Q9NQ40 469 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TREX1Q9NSU2 369 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 C1orf109Q9NX04 203 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 FKBPLQ9UIM3 349 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TPPPO94811 219 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 OPN1SWP03999 348 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ERVPABLB-1P60509 514 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 CSTF3Q12996 717 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SUZ12Q15022 739 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 IDO2Q6ZQW0 420 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 EIF3MQ7L2H7 374 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 SLC46A3Q7Z3Q1 461 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
VAMP1-201ENST00000361716 ZIC5Q96T25 663 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 MGLLQ99685 303 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 RNF121Q9H920 327 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 TM9SF3Q9HD45 589 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 MS4A12Q9NXJ0 267 aa12.33□□□□□ -0.44
VAMP1-201ENST00000361716 A0A0D9SEW6 157 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 PDPK1O15530 556 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 WBP4O75554 376 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 FABP3P05413 133 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 CLEC2LP0C7M8 214 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 IL2P60568 153 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 VEPH1Q14D04 833 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 COQ5Q5HYK3 327 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 PGBD5Q8N414 524 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 OR9Q1Q8NGQ5 310 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 IPCEF1Q8WWN9 437 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ST8SIA2Q92186 375 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 GGHQ92820 318 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 RIPOR3Q96MK2 946 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 INPP5KQ9BT40 448 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 GPR63Q9BZJ6 419 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 TM6SF2Q9BZW4 377 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 FAM105AQ9NUU6 356 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms