RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZNF527Q8NB42 609 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 NECTIN4Q96NY8 510 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 MOCS1Q9NZB8 636 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 SESN1Q9Y6P5 492 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 AP2A2O94973 939 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 EIF2B2P49770 351 aaKnown RBP18.06■□□□□ 0.48
CLIP2-202ENST00000361545 RAB6CQ53S08 254 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 DNAJB8Q8NHS0 232 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 CD244Q9BZW8 370 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 RAB6CQ9H0N0 254 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 NCDNQ9UBB6 729 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 CRYBG1Q9Y4K1 1723 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 CD70P32970 193 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 UFM1P61960 85 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 DMPKQ09013 629 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 MADCAM1Q13477 382 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 ZBED3Q96IU2 234 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-202ENST00000361545 PDCD10Q9BUL8 212 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 MRM3Q9HC36 420 aaKnown RBP18.06■□□□□ 0.48
CLIP2-202ENST00000361545 C8orf4Q9NR00 106 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 ACSL5Q9ULC5 683 aa18.06■□□□□ 0.48
CLIP2-202ENST00000361545 AHDC1Q5TGY3 1603 aaPredicted RBP18.06■□□□□ 0.48
CLIP2-202ENST00000361545 MAN2B1O00754 1011 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CDKN1CP49918 316 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SLC10A2Q12908 348 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 COL9A2Q14055 689 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 TICAM1Q8IUC6 712 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 RFKQ969G6 155 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 LRIG1Q96JA1 1093 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 MARCH7Q9H992 704 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PHF11Q9UIL8 331 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 MAFKO60675 156 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CHRM5P08912 532 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PEX2P28328 305 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 TM4SF4P48230 202 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SP140Q13342 867 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 C15orf39Q6ZRI6 1047 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 ZZZ3Q8IYH5 903 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 C10orf82Q8WW14 230 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 LRRC58Q96CX6 371 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 POLR2J3Q9H1A7 115 aaKnown RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 UBE2QL1A1L167 161 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PLK4O00444 970 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SSNA1O43805 119 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PSIP1O75475 530 aaKnown RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 RAP2AP10114 183 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 G6PDP11413 515 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PROZP22891 400 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 IL12RB1P42701 662 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CLEC12AQ5QGZ9 265 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 MRPL10Q7Z7H8 261 aaKnown RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CAND1Q86VP6 1230 aaKnown RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 GIMAP2Q9UG22 337 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 IRAK3Q9Y616 596 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 BTN3A3O00478 584 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 C9P02748 559 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 EBLN1P0CF75 366 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 ETS2P15036 469 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 ADARP55265 1226 aaKnown RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 ANKRD26P1Q6NSI1 321 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 LNX2Q8N448 690 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 RIT1Q92963 219 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 ABCB9Q9NP78 766 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SERINC1Q9NRX5 453 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PHF24Q9UPV7 400 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 MBLAC1A4D2B0 266 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CHRM1P11229 460 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SHMT2P34897 504 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 VSX2P58304 361 aaPredicted RBP18.05■□□□□ 0.48
CLIP2-202ENST00000361545 SVOPLQ8N434 492 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 CGREF1Q99674 301 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 OR8D2Q9GZM6 311 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 KCNH6Q9H252 994 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 Q9N2J8 555 aa18.05■□□□□ 0.48
CLIP2-202ENST00000361545 PRAMEF12O95522 483 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 DCTN2Q13561 401 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 KHDC1Q4VXA5 237 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 PLEKHS1Q5SXH7 462 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 SMYD5Q6GMV2 418 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 COX4I2Q96KJ9 171 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF347Q96SE7 839 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 TAS2R1Q9NYW7 299 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 SCDO00767 359 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 TNFRSF21O75509 655 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 CDC123O75794 336 aaPredicted RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 TRAPPC6AO75865 159 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 ADGRE1Q14246 886 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 MYBPC3Q14896 1274 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 EIF4HQ15056 248 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 LIN54Q6MZP7 749 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 TRAM1L1Q8N609 369 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 OR9I1Q8NGQ6 314 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 PKP4Q99569 1192 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 WDR6Q9NNW5 1121 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 NTSR1P30989 418 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 TRAP1Q12931 704 aaKnown RBP18.04■□□□□ 0.48
CLIP2-202ENST00000361545 HCFC1R1Q9NWW0 138 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 ZNF487B1APH4 448 aa18.04■□□□□ 0.48
CLIP2-202ENST00000361545 JUNDP17535 347 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms