RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 RIC8BQ9NVN3 520 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 MOSPD1Q9UJG1 213 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 LEF1Q9UJU2 399 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 EML5Q05BV3 1969 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 A0A1B0GTL3 188 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ZNF701M0R085 212 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 FXYD1O00168 92 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 TAPBPO15533 448 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 LATO43561 262 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 STK16O75716 305 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 PDGFBP01127 241 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 HOXC4P09017 264 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 TTKP33981 857 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 HPCAP84074 193 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CAPRIN1Q14444 709 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 NFE2L1Q14494 772 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CYP51A1Q16850 503 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ZXDCQ2QGD7 858 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 SPRED1Q7Z699 444 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 PTRH1Q86Y79 214 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 RASGRP3Q8IV61 690 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ADGRG5Q8IZF4 528 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GJD3Q8N144 294 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ZNF786Q8N393 782 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 OXR1Q8N573 874 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ATL1Q8WXF7 558 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 BMFQ96LC9 184 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 KCNA7Q96RP8 456 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 KCTD14Q9BQ13 255 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 AIG1Q9NVV5 245 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 WSB2Q9NYS7 404 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GIMAP2Q9UG22 337 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 PTGDR2Q9Y5Y4 395 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 SLCO1B1Q9Y6L6 691 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CACNA1IQ9P0X4 2223 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CCDC154A6NI56 674 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 TRIM64CA6NLI5 447 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 K7EPI3 171 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC22A3O75751 556 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 RASAL1O95294 804 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ESRRBO95718 433 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CEACAM5P06731 702 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CDK4P11802 303 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 HTR1BP28222 390 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CCT8P50990 548 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CCR5P51681 352 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 TBC1D25Q3MII6 688 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC36A3Q495N2 470 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ZBED5Q49AG3 693 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GPRIN3Q6ZVF9 776 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PROSER1Q86XN7 944 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 TMEM125Q96AQ2 219 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CCDC138Q96M89 665 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ZNF382Q96SR6 550 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 YTHDF1Q9BYJ9 559 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ALG2Q9H553 416 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC52A3Q9NQ40 469 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GMPR2Q9P2T1 348 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ANAPC2Q9UJX6 822 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC17A4Q9Y2C5 497 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 NCOR1O75376 2440 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PLXND1Q9Y4D7 1925 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 FANCMQ8IYD8 2048 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 A0A1B0GTW7 788 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ARHGEF33A8MVX0 844 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PLOD2O00469 737 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SCAMP1O15126 338 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 KCNJ13O60928 360 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 KATNA1O75449 491 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 EEDO75530 441 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 APBB3O95704 486 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 OTCP00480 354 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PRR35P0CG20 571 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 EPB42P16452 691 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PCSK6P29122 969 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CD6P30203 668 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 NUDT1P36639 197 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GSK3BP49841 420 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 KIAA1024LP59773 190 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 LIPEQ05469 1076 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 RCAN2Q14206 197 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PDCD4Q53EL6 469 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 KIAA0895LQ68EN5 471 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GCNT7Q6ZNI0 430 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PRR23BQ6ZRT6 265 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 CHST15Q7LFX5 561 aaPredicted RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 GOLGA7Q7Z5G4 137 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SPEM1Q8N4L4 309 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 PAPD5Q8NDF8 572 aaKnown RBP12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 TMIGD2Q96BF3 282 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 OCEL1Q9H607 264 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 IPPKQ9H8X2 491 aa12.73□□□□□ -0.37
SQSTM1-201ENST00000360718 ZIM2Q9NZV7 527 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms