RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 NIPAL4Q0D2K0 466 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 GALNT1Q10472 559 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TMEM115Q12893 351 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 NIPAL1Q6NVV3 410 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 AGTRAPQ6RW13 159 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 DPY19L3Q6ZPD9 716 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CAMKVQ8NCB2 501 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TRPV3Q8NET8 790 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 OR9A1PQ8NGU1 263 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ISG20Q96AZ6 181 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 NMD3Q96D46 503 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 RNFT2Q96EX2 444 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PLEKHG4BQ96PX9 1271 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ERVK-11Q9UQG0 969 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 KCTD3Q9Y597 815 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 FER1L6Q2WGJ9 1857 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CAPN8A6NHC0 703 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 IQCF5A8MTL0 148 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 MTX2O75431 263 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TIPRLO75663 272 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SLC25A12O75746 678 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 MFN2O95140 757 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SIX3O95343 332 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PENKP01210 267 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 HNRNPCP07910 306 aaKnown RBP eCLIP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 RAP2AP10114 183 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 MPIP34949 423 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ARCN1P48444 511 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PSMD4P55036 377 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CASP6P55212 293 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SLBPQ14493 270 aaKnown RBP eCLIP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TAZQ16635 292 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CDKL4Q5MAI5 379 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 LIPJQ5W064 366 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 THOC6Q86W42 341 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ARL10Q8N8L6 244 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 DCBLD1Q8N8Z6 715 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZMIZ2Q8NF64 920 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 GLYATL1Q969I3 302 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SLC38A4Q969I6 547 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZSWIM3Q96MP5 696 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TTYH1Q9H313 450 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PAPOLBQ9NRJ5 636 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 FAM120CQ9NX05 1096 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SMPD3Q9NY59 655 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SLC17A6Q9P2U8 582 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZDHHC2Q9UIJ5 367 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PSAT1Q9Y617 370 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 A0A1W2PP18 115 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 EFCAB10A6NFE3 127 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PRAMEF26H0Y7S4 382 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 GRID2O43424 1007 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 NR2F6P10588 404 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 HNRNPA2B1P22626 353 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CASRP41180 1078 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 RABIFP47224 123 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TAS2R41P59536 307 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TAS2R50P59544 299 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 MTAPQ13126 283 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PDCD4Q53EL6 469 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 METTL2BQ6P1Q9 378 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 B3GNT6Q6ZMB0 384 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 Q6ZVL8 140 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 APCDD1Q8J025 514 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PACRGLQ8N7B6 248 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 BPIFB6Q8NFQ5 453 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 WDR36Q8NI36 951 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ESAMQ96AP7 390 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 EXOSC8Q96B26 276 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CAMK1GQ96NX5 476 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 FCRL3Q96P31 734 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ADI1Q9BV57 179 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SLC17A9Q9BYT1 436 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZBTB26Q9HCK0 441 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PRRC2BQ5JSZ5 2229 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 A0A1W2PRB8 838 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 FADS2P1A8MWK0 482 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CXCR6O00574 342 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ALDOAP04075 364 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CSNK2A2P19784 350 aaPredicted RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZNF33BQ06732 778 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 RALGDSQ12967 914 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TRAF3Q13114 568 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 SMAD2Q15796 467 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 PTCHD3Q3KNS1 767 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 IFI44LQ53G44 452 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TECRLQ5HYJ1 363 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 KHDRBS2Q5VWX1 349 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 GOLGA7Q7Z5G4 137 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TRIM74Q86UV6 250 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 CROCCP3Q8IVE0 287 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZCCHC7Q8N3Z6 543 aaKnown RBP6.83□□□□□ -1.32
RAB5B-201ENST00000360299 NPWQ8N729 165 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 ZNF540Q8NDQ6 660 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 DEFB124Q8NES8 71 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 KBTBD8Q8NFY9 601 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 DENND1AQ8TEH3 1009 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 RIT1Q92963 219 aa6.83□□□□□ -1.32
RAB5B-201ENST00000360299 TGM7Q96PF1 710 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms