RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ANKDD1AQ495B1 522 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 VPS26BQ4G0F5 336 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 GGTA1PQ4G0N0 100 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 MBOAT1Q6ZNC8 495 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RETREG3Q86VR2 466 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 PLA2G15Q8NCC3 412 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 GIPC3Q8TF64 312 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM159Q96B96 161 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TOE1Q96GM8 510 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TRIM8Q9BZR9 551 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TUBA8Q9NY65 449 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CCL27Q9Y4X3 112 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 VPS13AQ96RL7 3174 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC5A10A0PJK1 596 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 M0R296 226 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 IFRD1O00458 451 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SOCS2O14508 198 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC31A1O15431 190 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 FOXD2O60548 495 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 PSIP1O75475 530 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SOD1P00441 154 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 STT3AP46977 705 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 DMWDQ09019 674 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 NR6A1Q15406 480 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 AP5B1Q2VPB7 878 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF648Q5T619 568 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 RAET1GQ6H3X3 334 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 GALNT13Q8IUC8 556 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 USP7Q93009 1102 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF597Q96LX8 424 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 OSBPL10Q9BXB5 764 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 TPK1Q9H3S4 243 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 ITGB1BP2Q9UKP3 347 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 K7ESF4 209 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 AKAP10O43572 662 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SEMA4FO95754 770 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 KRT6AP02538 564 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 KRT6BP04259 564 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 PCCBP05166 539 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 GNAO1P09471 354 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 GRIA3P42263 894 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 ZFP36L2P47974 494 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 KRT6CP48668 564 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 POLR2JP52435 117 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC7A2P52569 658 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 CTSCP53634 463 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 RPS21P63220 83 aaKnown RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 RHDQ02161 417 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 WSCD2Q2TBF2 565 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 SYTL3Q4VX76 610 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 HORMAD1Q86X24 394 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 BEND7Q8N7W2 519 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 FAM47BQ8NA70 645 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 GPR174Q9BXC1 333 aa13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 C6orf106Q9H6K1 298 aaPredicted RBP13.42□□□□□ -0.26
CSNK1E-201ENST00000359867 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 MANBAO00462 879 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 EEDO75530 441 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 H6PDO95479 791 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 NPPAP01160 153 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 C8BP07358 591 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 EPORP19235 508 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 UFM1P61960 85 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 CD300CQ08708 224 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 PRKG2Q13237 762 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM220Q6QAJ8 160 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 CARM1Q86X55 608 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 DEFB119Q8N690 84 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 CANT1Q8WVQ1 401 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ATL1Q8WXF7 558 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 RMND5BQ96G75 393 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 C1orf50Q9BV19 199 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC17A9Q9BYT1 436 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ACTR8Q9H981 624 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 OLAHQ9NV23 265 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 DNAJC11Q9NVH1 559 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ABCD2Q9UBJ2 740 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 KLQ9UEF7 1012 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 LEF1Q9UJU2 399 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 SDK1Q7Z5N4 2213 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ANKRD12Q6UB98 2062 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 CAPNS1P04632 268 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 PCSK2P16519 638 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ZNF23P17027 643 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 GPR1P46091 355 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 YBX1P67809 324 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 SGCGQ13326 291 aa13.41□□□□□ -0.26
CSNK1E-201ENST00000359867 PTCHD3Q3KNS1 767 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms