RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DNAJB8Q8NHS0 232 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PHF10Q8WUB8 498 aaKnown RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 HSH2DQ96JZ2 352 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 HSFX1Q9UBD0 423 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 TNFRSF11BO00300 401 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 KLK8O60259 260 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 MITFO75030 526 aaPredicted RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 FGF19O95750 216 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 KLK1P06870 262 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 SLC35G4P0C7Q5 338 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
SSU72-202ENST00000359060 ENTPD1P49961 510 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 DGKEP52429 567 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 GPNMBQ14956 572 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 SLC36A3Q495N2 470 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 DLEU7Q6UYE1 221 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 CNIH3Q8TBE1 160 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 FAM81AQ8TBF8 368 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ASB11Q8WXH4 323 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 UBE2E3Q969T4 207 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 NUS1Q96E22 293 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 IL17FQ96PD4 163 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ZNF451Q9Y4E5 1061 aa10.84□□□□□ -0.67
SSU72-202ENST00000359060 ARHGEF33A8MVX0 844 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 UGT2B11O75310 529 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 DDX5P17844 614 aaKnown RBP10.83□□□□□ -0.68
SSU72-202ENST00000359060 FAM180BQ6P0A1 224 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 NEK5Q6P3R8 708 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 GALNT18Q6P9A2 607 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 TBPL2Q6SJ96 375 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 ZNF605Q86T29 641 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 GIPC3Q8TF64 312 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 BTN2A2Q8WVV5 523 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 EZH1Q92800 747 aaPredicted RBP10.83□□□□□ -0.68
SSU72-202ENST00000359060 C1QTNF3Q9BXJ4 246 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 RDH14Q9HBH5 336 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 MAPRE3Q9UPY8 281 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 CORO2BQ9UQ03 480 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 ASPDHA6ND91 283 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 BMP10O95393 424 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 EPCAMP16422 314 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 SYN1P17600 705 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 IFNA8P32881 189 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 GRK3P35626 688 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 SP140Q13342 867 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 NR1D2Q14995 579 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 OR2A12Q8NGT7 310 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 MAL2Q969L2 176 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 EXOSC8Q96B26 276 aaKnown RBP10.83□□□□□ -0.68
SSU72-202ENST00000359060 BBS4Q96RK4 519 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 CEPT1Q9Y6K0 416 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 AP1G1O43747 822 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 MPC1LP0DKB6 136 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 PCSK6P29122 969 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 KDELR2P33947 212 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 CA5AP35218 305 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 POLR2IP36954 125 aaKnown RBP10.83□□□□□ -0.68
SSU72-202ENST00000359060 TRPC1P48995 793 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 ERVFC1P60507 584 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 VMACQ2NL98 169 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 RUNDC3AQ59EK9 446 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 C6orf141Q5SZD1 244 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 TNFAIP8L2Q6P589 184 aaPredicted RBP10.83□□□□□ -0.68
SSU72-202ENST00000359060 ZNF773Q6PK81 442 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 TICAM1Q8IUC6 712 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 PROX1Q92786 737 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 HSPBAP1Q96EW2 488 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 FAM118AQ9NWS6 357 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 HS3ST2Q9Y278 367 aa10.83□□□□□ -0.68
SSU72-202ENST00000359060 WISP3O95389 354 aaPredicted RBP10.82□□□□□ -0.68
SSU72-202ENST00000359060 NFATC1O95644 943 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 STATHP02808 62 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 PDHA2P29803 388 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 OR1E2P47887 323 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 TAS2R50P59544 299 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 DHCR24Q15392 516 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSU72-202ENST00000359060 GCNT6Q5T4J0 391 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 NPAS3Q8IXF0 933 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 TRAM1L1Q8N609 369 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 SMYD1Q8NB12 490 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 HUS1BQ8NHY5 278 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 RAD51AP1Q96B01 352 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 IKZF5Q9H5V7 419 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 CLMPQ9H6B4 373 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 TUBA8Q9NY65 449 aaPredicted RBP10.82□□□□□ -0.68
SSU72-202ENST00000359060 AASSQ9UDR5 926 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 OR51B4Q9Y5P0 310 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 H0YAE9 185 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 J3QRK9 145 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 M0QX08 132 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 NUAK1O60285 661 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 CNOT3O75175 753 aaKnown RBP10.82□□□□□ -0.68
SSU72-202ENST00000359060 NADKO95544 446 aaPredicted RBP10.82□□□□□ -0.68
SSU72-202ENST00000359060 RPN2P04844 631 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 GSTM1P09488 218 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 CD9P21926 228 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 DCTP40126 519 aa10.82□□□□□ -0.68
SSU72-202ENST00000359060 CSNK1DP48730 415 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms