RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 ITPRIPL2Q3MIP1 535 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 XKR7Q5GH72 579 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 SUSD1Q6UWL2 747 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 MIER2Q8N344 545 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 FLCNQ8NFG4 579 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 TMEM159Q96B96 161 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 TMEM74Q96NL1 305 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 GPR45Q9Y5Y3 372 aa17.34■□□□□ 0.37
PDE4D-204ENST00000358923 ARNTLO00327 626 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 CCNA2P20248 432 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 SLC7A2P52569 658 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 NKX2-5P52952 324 aaPredicted RBP17.33■□□□□ 0.37
PDE4D-204ENST00000358923 RABL3Q5HYI8 236 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 TRMT11Q7Z4G4 463 aaKnown RBP17.33■□□□□ 0.37
PDE4D-204ENST00000358923 MINDY2Q8NBR6 621 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 ASZ1Q8WWH4 475 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 TRPV4Q9HBA0 871 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 MOV10Q9HCE1 1003 aaKnown RBP17.33■□□□□ 0.37
PDE4D-204ENST00000358923 CRNNQ9UBG3 495 aaPredicted RBP17.33■□□□□ 0.37
PDE4D-204ENST00000358923 EGFL7Q9UHF1 273 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 SH2B3Q9UQQ2 575 aa17.33■□□□□ 0.37
PDE4D-204ENST00000358923 CRYZL1O95825 349 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 HIST1H2AGP0C0S8 130 aaPredicted RBP17.33■□□□□ 0.36
PDE4D-204ENST00000358923 HIST1H2ADP20671 130 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 MEF2AQ02078 507 aaPredicted RBP17.33■□□□□ 0.36
PDE4D-204ENST00000358923 FGL2Q14314 439 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 SULT1C3Q6IMI6 304 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 C16orf89Q6UX73 402 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 CHRDL2Q6WN34 429 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 FRMD1Q8N878 549 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 HIST1H2AHQ96KK5 128 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 MTERF1Q99551 399 aaKnown RBP17.33■□□□□ 0.36
PDE4D-204ENST00000358923 HIST1H2AJQ99878 128 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 H2AFJQ9BTM1 129 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 ACAT2Q9BWD1 397 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 POLR1BQ9H9Y6 1135 aa17.33■□□□□ 0.36
PDE4D-204ENST00000358923 CENPBD1B2RD01 187 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CLPXO76031 633 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 EGFP01133 1207 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ZFP36L2P47974 494 aaKnown RBP17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ATP6AP1LQ52LC2 224 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 PIGGQ5H8A4 983 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 TMTC4Q5T4D3 741 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CCDC81Q6ZN84 652 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 GRAMD2AQ8IUY3 354 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 RGL4Q8IZJ4 473 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CLIP4Q8N3C7 705 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 SLC12A9Q9BXP2 914 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ANKRD60Q9BZ19 345 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ACTL8Q9H568 366 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 PLEKHM1Q9Y4G2 1056 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 RGS13O14921 159 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 LRATO95237 230 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 OTCP00480 354 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 PDYNP01213 254 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 C1QCP02747 245 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 POU2F2P09086 479 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 NAT2P11245 290 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CD22P20273 847 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 COL9A1P20849 921 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 HPCAL1P37235 193 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 INPP5AQ14642 412 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CST6Q15828 149 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 TMIEQ8NEW7 156 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 CXorf40AQ8TE69 158 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ZNF486Q96H40 463 aaPredicted RBP17.32■□□□□ 0.36
PDE4D-204ENST00000358923 ASB2Q96Q27 587 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 MRPL40Q9NQ50 206 aaKnown RBP17.32■□□□□ 0.36
PDE4D-204ENST00000358923 LIMD1Q9UGP4 676 aa17.32■□□□□ 0.36
PDE4D-204ENST00000358923 NUAK1O60285 661 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 APODP05090 189 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 NR4A2P43354 598 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 EIF4HQ15056 248 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 WSCD2Q2TBF2 565 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 CCDC58Q4VC31 144 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 LDLRAP1Q5SW96 308 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 AGBL4Q5VU57 503 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 TNIP2Q8NFZ5 429 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 PROKR1Q8TCW9 393 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 EGLN2Q96KS0 407 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 SDR39U1Q9NRG7 319 aaPredicted RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 TNPO3Q9Y5L0 923 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 PRAMEF33A0A0G2JMD5 474 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 E7EQ34 232 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 ATG13O75143 517 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 POP7O75817 140 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 EFNA1P20827 205 aaPredicted RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 PTPN5P54829 565 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 PUS10Q3MIT2 529 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 LSM14AQ8ND56 463 aaKnown RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 OR4K3Q96R72 315 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 SMOXQ9NWM0 555 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 ULK1O75385 1050 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 SEC22BO75396 215 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 SEC24DO94855 1032 aaPredicted RBP17.31■□□□□ 0.36
PDE4D-204ENST00000358923 DCDC1P59894 354 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 PFN3P60673 137 aa17.31■□□□□ 0.36
PDE4D-204ENST00000358923 DNASE1L3Q13609 305 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms