RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 NLGN4XQ8N0W4 816 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 C10orf111Q8N326 155 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 C1orf52Q8N6N3 182 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 BEND7Q8N7W2 519 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 PIH1D2Q8WWB5 315 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 DNASE1L2Q92874 299 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TRNT1Q96Q11 434 aaKnown RBP6.38□□□□□ -1.39
CSDE1-203ENST00000358528 PKP4Q99569 1192 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 DUSP26Q9BV47 211 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 SLC32A1Q9H598 525 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 DYRK4Q9NR20 520 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 TLR9Q9NR96 1032 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 DNAJC11Q9NVH1 559 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 ACSL6Q9UKU0 697 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 B3GNT3Q9Y2A9 372 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MED16Q9Y2X0 877 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MYO7AQ13402 2215 aa6.38□□□□□ -1.39
CSDE1-203ENST00000358528 MIA3Q5JRA6 1907 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SAGE2PA6NJ88 616 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SOBPA7XYQ1 873 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 WASH4PA8MWX3 477 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 M0QX08 132 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 M0QZQ0 153 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CTDSP2O14595 271 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 KDELR3O43731 214 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 OR10H3O60404 316 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 UPK1BO75841 260 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PRSS23O95084 383 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 GABARAPO95166 117 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 C1QCP02747 245 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 C9P02748 559 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 LAMP1P11279 417 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ELNP15502 786 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SLC15A1P46059 708 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 KRR1Q13601 381 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SETMARQ53H47 684 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 PYDC2Q56P42 97 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RGMBQ6NW40 437 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SHQ1Q6PI26 577 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DEF8Q6ZN54 512 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 LIMS2Q7Z4I7 341 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ADCK2Q7Z695 626 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 GPR149Q86SP6 731 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TMPRSS11BQ86T26 416 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TEX26Q8N6G2 289 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 LMNTD1Q8N9Z9 388 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RHOXF1Q8NHV9 184 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ENKURQ8TC29 256 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ITPKCQ96DU7 683 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FUBP3Q96I24 572 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 C8orf48Q96LL4 319 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MGME1Q9BQP7 344 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 BRD9Q9H8M2 597 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MIEF1Q9NQG6 463 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MS4A12Q9NXJ0 267 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 KCTD5Q9NXV2 234 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FNIP2Q9P278 1114 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ANKMY1Q9P2S6 941 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 NUMA1Q14980 2115 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DOCK3Q8IZD9 2030 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ILVBLA1L0T0 632 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ANKDD1BA6NHY2 528 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MYL12BO14950 172 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 KIAA0513O60268 411 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 B4GALT3O60512 393 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 JRKO75564 520 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 INHBBP09529 407 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 EBLN1P0CF75 366 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SDC1P18827 310 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SERPINA4P29622 427 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SPAM1P38567 509 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FEN1P39748 380 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RAB25P57735 213 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 NFATC2Q13469 925 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DUOXA1Q1HG43 343 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FRG2Q64ET8 278 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CASP12Q6UXS9 341 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 NEK10Q6ZWH5 1172 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SNX20Q7Z614 316 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 HMGN2P46Q86SG4 172 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 SLC5A8Q8N695 610 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 ARL14EPQ8N8R7 260 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 MINDY2Q8NBR6 621 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 C11orf65Q8NCR3 313 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 OR9Q2Q8NGE9 314 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DPF3Q92784 378 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TMEM159Q96B96 161 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 RHBDF1Q96CC6 855 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FRG2BQ96QU4 278 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 GFM1Q96RP9 751 aaKnown RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CRISPLD1Q9H336 500 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 GPBP1L1Q9HC44 474 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CLN6Q9NWW5 311 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 DNAJC27Q9NZQ0 273 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TRPC4Q9UBN4 977 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TRIM64CA6NLI5 447 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 FAM220BPB1ANY3 271 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 H3BM21 787 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 CCRL2O00421 344 aa6.37□□□□□ -1.39
CSDE1-203ENST00000358528 TAPBPO15533 448 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms