RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR10T2Q8NGX3 314 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ERVK-18Q9QC07 812 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SMIM28A0A1B0GU29 152 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 GRM6O15303 877 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 RCBTB2O95199 551 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 AHSGP02765 367 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ASPAP45381 313 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 DAOAP59103 153 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CLEC12AQ5QGZ9 265 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 IRAK1BP1Q5VVH5 260 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 FIBCD1Q8N539 461 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR5T3Q8NGG3 340 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 GATAD2BQ8WXI9 593 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 DPCDQ9BVM2 203 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF700Q9H0M5 742 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 GBA2Q9HCG7 927 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MKKSQ9NPJ1 570 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 XPNPEP1Q9NQW7 623 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PADI2Q9Y2J8 665 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 TBC1D3BA6NDS4 549 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 IL1BP01584 269 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 GJB1P08034 283 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 FUT4P22083 530 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 DDX6P26196 483 aaKnown RBP eCLIP12.39□□□□□ -0.431e-27■■■■■ 37
SYNCRIP-201ENST00000355238 FNTBP49356 437 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PGDP52209 483 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDK6Q00534 326 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CREMQ03060 361 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 RASGEF1BQ0VAM2 473 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SF1Q15637 639 aaKnown RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PHYKPLQ8IUZ5 450 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CNIH3Q8TBE1 160 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 THRSPQ92748 146 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PPIL3Q9H2H8 161 aaKnown RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHA2Q9Y5H9 948 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 FOXD2O60548 495 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAPK3P27361 379 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 STXBP1P61764 594 aaKnown RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 VLDLRP98155 873 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC3A1Q07837 685 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 TRAM1Q15629 374 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF630Q2M218 657 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 COMMD7Q86VX2 200 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PDZD9Q8IXQ8 264 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.38□□□□□ -0.432e-7■■■■□ 24
SYNCRIP-201ENST00000355238 DEDD2Q8WXF8 326 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 B3GNT4Q9C0J1 378 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ELOA3DA6NLF2 546 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 BTBD19C9JJ37 291 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PET100P0DJ07 73 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 TFPIP10646 304 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 HCAR3P49019 387 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CXCL9Q07325 125 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZMYND11Q15326 602 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ELOA3BQ3SY89 546 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 POM121L1PQ3SYA9 428 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDKL4Q5MAI5 379 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ELOA3Q8NG57 546 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR13J1Q8NGT2 312 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PKP4Q99569 1192 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 IMP3Q9NV31 184 aaKnown RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 EVLQ9UI08 416 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC27A5Q9Y2P5 690 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHB3Q9Y5E6 796 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 WNT10BO00744 389 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 HTR1BP28222 390 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 GLIS1Q8NBF1 620 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR8D1Q8WZ84 308 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 NTPCRQ9BSD7 190 aaKnown RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 SMOXQ9NWM0 555 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PRKYO43930 277 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 IL3P08700 152 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 VAMP1P23763 118 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 DGKGP49619 791 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC25A11Q02978 314 aaKnown RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 AIMP2Q13155 320 aaKnown RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 BTG3Q14201 252 aaPredicted RBP12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC32A1Q9H598 525 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CLCA3PQ9Y6N3 262 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 KRBA1A5PL33 1030 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PDHXO00330 501 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHGA12O60330 932 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 MT-ND2P03891 347 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 OPN1SWP03999 348 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CSN2P05814 226 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 G6PDP11413 515 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CES5AQ6NT32 575 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 TMED4Q7Z7H5 227 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 ABHD11Q8NFV4 315 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CD300LFQ8TDQ1 290 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 FCAMRQ8WWV6 532 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 GAL3ST1Q99999 423 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 PDZD7Q9H5P4 517 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 TMEM184CQ9NVA4 438 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 NDUFAF4Q9P032 175 aa12.38□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDC14AQ9UNH5 594 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms