RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CSN2P05814 226 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 ANXA8P13928 327 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PGAM2P15259 253 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 SLC25A11Q02978 314 aaKnown RBP12.87□□□□□ -0.35
SCN8A-202ENST00000355133 CD47Q08722 323 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 LY6G5CQ5SRR4 150 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 PDPRQ8NCN5 879 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 OR51B5Q9H339 312 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 ZDHHC18Q9NUE0 388 aa12.87□□□□□ -0.35
SCN8A-202ENST00000355133 TRBC2A0A5B9 178 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 SAGE2PA6NJ88 616 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 FAM159BA6NKW6 160 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ARPC2O15144 300 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF30P17039 623 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 HSD11B1P28845 292 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 GPR17Q13304 367 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 SUSD1Q6UWL2 747 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 EBF2Q9HAK2 575 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 UPB1Q9UBR1 384 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 RBMX2Q9Y388 322 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TLR4O00206 839 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 OR1I1O60431 355 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CBSLP0DN79 551 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CBSP35520 551 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PREPP48147 710 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 WDR4P57081 412 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 DUOXA1Q1HG43 343 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ZC3HC1Q86WB0 502 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ADAD1Q96M93 576 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CGREF1Q99674 301 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PCDHB11Q9Y5F2 797 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 MID1O15344 667 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PRKD3O94806 890 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CSTF2P33240 577 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 UFM1P61960 85 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 RPS13P62277 151 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 JAG1P78504 1218 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TYSND1Q2T9J0 566 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CDCA2Q69YH5 1023 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 GKN2Q86XP6 184 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 OSBPL7Q9BZF2 842 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CHIAQ9BZP6 476 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TAS2R1Q9NYW7 299 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 DPPA5A6NC42 116 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 H3BSH0 61 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 KMOO15229 486 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 EDNRAP25101 427 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 EEFSECP57772 596 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CSTF1Q05048 431 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 INAVAQ3KP66 663 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TRIM74Q86UV6 250 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 GIN1Q9NXP7 522 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ECHS1P30084 290 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 EIF1AXP47813 144 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 OR3A3P47888 321 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 OR3A2P47893 321 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 TIGD6Q17RP2 521 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 PTCHD3Q3KNS1 767 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF792Q3KQV3 632 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF461Q8TAF7 563 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 DNAJA4Q8WW22 397 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-202ENST00000355133 CITED4Q96RK1 184 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 HSD3B7Q9H2F3 369 aa12.86□□□□□ -0.35
SCN8A-202ENST00000355133 ASTE1Q2TB18 679 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF554Q86TJ5 538 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CCDC36Q8IYA8 594 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF615Q8N8J6 731 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 OR52E4Q8NGH9 312 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 OR10Q1Q8NGQ4 319 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF395Q9H8N7 513 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 SDHAF3Q9NRP4 125 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 C3P01024 1663 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 EFCAB9A8MZ26 197 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 PDLIM1O00151 329 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CH25HO95992 272 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 AGR2O95994 175 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 DNAJA1P31689 397 aaKnown RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 OR12D2P58182 307 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 TMEM44Q2T9K0 475 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 SLC9B2Q86UD5 537 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CEP97Q8IW35 865 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 SLC5A11Q8WWX8 675 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 GEMIN6Q8WXD5 167 aaKnown RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CNDP2Q96KP4 475 aaKnown RBP12.85□□□□□ -0.35
SCN8A-202ENST00000355133 TIMMDC1Q9NPL8 285 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 CAPN14A8MX76 684 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 GRXCR1A8MXD5 290 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 COQ9O75208 318 aa12.85□□□□□ -0.35
SCN8A-202ENST00000355133 ID2Q02363 134 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms