RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 YTHDF1Q9BYJ9 559 aaKnown RBP9.12□□□□□ -0.95
SMG6-202ENST00000354901 FNIP2Q9P278 1114 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 TMPRSS11EQ9UL52 423 aa9.12□□□□□ -0.95
SMG6-202ENST00000354901 SMIM30A4D0T7 59 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PRMT5O14744 637 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 OR2B3O76000 313 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CST1P01037 141 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 RPS17P08708 135 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 UROSP10746 265 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 HSPA7P48741 367 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 RCAN2Q14206 197 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GPR68Q15743 365 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CTSL3PQ5NE16 218 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 RNF219Q5W0B1 726 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GPR150Q8NGU9 434 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CDC26Q8NHZ8 85 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PROKR1Q8TCW9 393 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 WBP2Q969T9 261 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TADA1Q96BN2 335 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PYCR2Q96C36 320 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 MTFMTQ96DP5 389 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 TRIB3Q96RU7 358 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 AMBRA1Q9C0C7 1298 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ELOVL6Q9H5J4 265 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 C12orf10Q9HB07 376 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PDFQ9HBH1 243 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PRM3Q9NNZ6 103 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 FARSBQ9NSD9 589 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 OLA1Q9NTK5 396 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 GLTPQ9NZD2 209 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CPNE7Q9UBL6 633 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 LEF1Q9UJU2 399 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 INTS6Q9UL03 887 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 ORC6Q9Y5N6 252 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 FNDC1Q4ZHG4 1894 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 CCDC182A6NF36 153 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 BCKDKO14874 412 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PDPK1O15530 556 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 SLC2A4P14672 509 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ITGALP20701 1170 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GADD45AP24522 165 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GKP32189 559 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ATP5C1P36542 298 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 MAPKAPK2P49137 400 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 SUOXP51687 545 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PRKG2Q13237 762 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ZNF177Q13360 481 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 RAPSNQ13702 412 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PTGR1Q14914 329 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 FAM26DQ5JW98 314 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 FAM151BQ6UXP7 276 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 Q6ZSR9 355 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 ZBTB44Q8NCP5 570 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CD200R1Q8TD46 325 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PXYLP1Q8TE99 480 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PHF10Q8WUB8 498 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 ASB12Q8WXK4 309 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 UBE2FQ969M7 185 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 THUMPD3Q9BV44 507 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 C1QTNF7Q9BXJ2 289 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 SAV1Q9H4B6 383 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 FCF1Q9Y324 198 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 TRIM64A6NGJ6 449 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 MATN4O95460 622 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 EPOP01588 193 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 KLKB1P03952 638 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 PDGFAP04085 211 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GPIP06744 558 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 RPL35P42766 123 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 SOX9P48436 509 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 RPL38P63173 70 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 HMGCS1Q01581 520 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 GRM7Q14831 915 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TAF1AQ15573 450 aaPredicted RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 YIF1BQ5BJH7 314 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CFAP77Q6ZQR2 320 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 USP51Q70EK9 711 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 MILR1Q7Z6M3 343 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TMEM199Q8N511 208 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 NKAPQ8N5F7 415 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 AMER2Q8N7J2 671 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 FAM86B1Q8N7N1 296 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 LINC00469Q8N7U9 141 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.954e-7■■■■□ 26
SMG6-202ENST00000354901 CNDP2Q96KP4 475 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 MGME1Q9BQP7 344 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 BOCQ9BWV1 1114 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 CDADC1Q9BWV3 514 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TRIM54Q9BYV2 358 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 NSUN3Q9H649 340 aaKnown RBP9.11□□□□□ -0.95
SMG6-202ENST00000354901 TLR9Q9NR96 1032 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 SCN3BQ9NY72 215 aa9.11□□□□□ -0.95
SMG6-202ENST00000354901 TET1Q8NFU7 2136 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms