RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TMEM174Q8WUU8 243 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 TP53INP1Q96A56 240 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SLC39A13Q96H72 371 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 IGFBP5P24593 272 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ALG11Q2TAA5 492 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 LACTB2Q53H82 288 aaPredicted RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 SPIN4Q56A73 249 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ARHGAP40Q5TG30 622 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SMARCD3Q6STE5 483 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 FGD2Q7Z6J4 655 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 GALNT10Q86SR1 603 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ZDHHC21Q8IVQ6 265 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ART5Q96L15 291 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 FAM83CQ9BQN1 747 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 CHID1Q9BWS9 393 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 C8orf33Q9H7E9 229 aaPredicted RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 LAMB1P07942 1786 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 PGRP06401 933 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 OC90Q02509 493 aaPredicted RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 MAPK11Q15759 364 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 UNC50Q53HI1 259 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 FAM180BQ6P0A1 224 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 FAM81AQ8TBF8 368 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 RANBP9Q96S59 729 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 CGREF1Q99674 301 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 DPH7Q9BTV6 452 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 SUCOQ9UBS9 1254 aaKnown RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 BCORQ6W2J9 1755 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 BCL10O95999 233 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 TCF3P15923 654 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 ST13P50502 369 aaKnown RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 RNF144AP50876 292 aaPredicted RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 DEFB134Q4QY38 66 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 PIH1D2Q8WWB5 315 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 IPCEF1Q8WWN9 437 aaPredicted RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 OSBPL10Q9BXB5 764 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 RETREG1Q9H6L5 497 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 EPS8L2Q9H6S3 715 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 ZNF282Q9UDV7 671 aaPredicted RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 B4GALT3O60512 393 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 MAOBP27338 520 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 ELOCQ15369 112 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 CDC73Q6P1J9 531 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■□□□□ 11.1
SMC6-201ENST00000351948 MIEF2Q96C03 454 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 BHMG1C9JSJ3 638 aaPredicted RBP13.29□□□□□ -0.28
SMC6-201ENST00000351948 DIRAS1O95057 198 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 DLGAP3O95886 979 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 CSTF2P33240 577 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMC6-201ENST00000351948 MED22Q15528 200 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 RFX4Q33E94 735 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 IER5LQ5T953 404 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 STEAP4Q687X5 459 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 KRTCAP2Q8N6L1 136 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 PIK3C3Q8NEB9 887 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 GPR34Q9UPC5 381 aa13.29□□□□□ -0.28
SMC6-201ENST00000351948 STX16O14662 325 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 BCHEP06276 602 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 ADSLP30566 484 aaPredicted RBP13.28□□□□□ -0.28
SMC6-201ENST00000351948 ADGRE1Q14246 886 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 DCST1Q5T197 706 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 HMGN2P46Q86SG4 172 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 RNF168Q8IYW5 571 aaPredicted RBP13.28□□□□□ -0.28
SMC6-201ENST00000351948 LRRC3Q9BY71 257 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SLC29A3Q9BZD2 475 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 KLF15Q9UIH9 416 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 C6orf47O95873 294 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SLC16A8O95907 504 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 PDYNP01213 254 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 FDXRP22570 491 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 PRDX6P30041 224 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SLC18A1P54219 525 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 C6orf136Q5SQH8 315 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 RTL4Q6ZR62 310 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 RAB8BQ92930 207 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 PEX13Q92968 403 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 BTN3A3O00478 584 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 KLF11O14901 512 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 WFS1O76024 890 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SCELO95171 688 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SP140Q13342 867 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 SCARB2Q14108 478 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 PEX5LQ8IYB4 626 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 ARL10Q8N8L6 244 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 LMNTD1Q8N9Z9 388 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 WFDC5Q8TCV5 224 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 F2RL3Q96RI0 385 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 ADAMTSL1Q8N6G6 1762 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.28□□□□□ -0.28
SMC6-201ENST00000351948 CKMT2P17540 419 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms