RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 NR4A1P22736 598 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 PHEXP78562 749 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 LAPTM4AQ15012 233 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 DPY19L3Q6ZPD9 716 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 CBLL1Q75N03 491 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 EIF3MQ7L2H7 374 aaKnown RBP21.3■■□□□ 1
NKX2-4-201ENST00000351817 PTOV1Q86YD1 416 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 CENPSQ8N2Z9 138 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 RNF175Q8N4F7 328 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 ASPSCR1Q9BZE9 553 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 RC3H2Q9HBD1 1191 aaKnown RBP21.3■■□□□ 1
NKX2-4-201ENST00000351817 ERVK-18Q9QC07 812 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 VPS29Q9UBQ0 182 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 SLC25A13Q9UJS0 675 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 RUVBL1Q9Y265 456 aaKnown RBP21.3■■□□□ 1
NKX2-4-201ENST00000351817 GMPPBQ9Y5P6 360 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 DGKBQ9Y6T7 804 aa21.3■■□□□ 1
NKX2-4-201ENST00000351817 hCG_2039718K7EN88 272 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 CYP4B1P13584 511 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 HLA-FP30511 346 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 FMO3P31513 532 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 C21orf58P58505 322 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 DEFB103AP81534 67 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 OCA2Q04671 838 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 GPR155Q7Z3F1 870 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 ELMO1Q92556 727 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 ZNF347Q96SE7 839 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 CEP44Q9C0F1 390 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 CRISPLD2Q9H0B8 497 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 ERGIC3Q9Y282 383 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 ATP11BQ9Y2G3 1177 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 TRAV19A0A0A6YYK7 116 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 KRT87PA6NCN2 255 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 GRM6O15303 877 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 JRKO75564 520 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 GABARAPO95166 117 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 CPSF4O95639 269 aaKnown RBP21.29■■□□□ 1
NKX2-4-201ENST00000351817 C1QCP02747 245 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 SLC35A2P78381 396 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 VLDLRP98155 873 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 NPTX1Q15818 432 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 LRRC73Q5JTD7 316 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 C1orf53Q5VUE5 145 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 DDX53Q86TM3 631 aaKnown RBP21.29■■□□□ 1
NKX2-4-201ENST00000351817 RASGRP3Q8IV61 690 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 CPA6Q8N4T0 437 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 TTC29Q8NA56 475 aaPredicted RBP21.29■■□□□ 1
NKX2-4-201ENST00000351817 STARD8Q92502 1023 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 HSH2DQ96JZ2 352 aa21.29■■□□□ 1
NKX2-4-201ENST00000351817 PDP1Q9P0J1 537 aaPredicted RBP21.29■■□□□ 1
NKX2-4-201ENST00000351817 SULT1C4O75897 302 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 POLR2LP62875 67 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 VEZF1Q14119 521 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 XKR6Q5GH73 641 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 VTCN1Q7Z7D3 282 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 HS6ST3Q8IZP7 471 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 WDR20Q8TBZ3 569 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 ASZ1Q8WWH4 475 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 BBS2Q9BXC9 721 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 TMEM39AQ9NV64 488 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 CHCHD3Q9NX63 227 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 PCDH10Q9P2E7 1040 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 COQ6Q9Y2Z9 468 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 SAMHD1Q9Y3Z3 626 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 PCDHGA10Q9Y5H3 936 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 SOBPA7XYQ1 873 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 LEFTY2O00292 366 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 TEX28O15482 410 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 MTX2O75431 263 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 DIRAS1O95057 198 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 FKBP9O95302 570 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 CD22P20273 847 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 ZNF846Q147U1 533 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 RGS21Q2M5E4 152 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 PIWIL3Q7Z3Z3 882 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 GALNT10Q86SR1 603 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 SH3YL1Q96HL8 342 aaPredicted RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 METTL2AQ96IZ6 378 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 SPG21Q9NZD8 308 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 NDRG4Q9ULP0 352 aaKnown RBP21.28■■□□□ 1
NKX2-4-201ENST00000351817 PCDHB11Q9Y5F2 797 aa21.28■■□□□ 1
NKX2-4-201ENST00000351817 SLC22A1O15245 554 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 MYO1DO94832 1006 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 AP2A2O94973 939 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 GSTM1P09488 218 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 ACVR2AP27037 513 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 OPRL1P41146 370 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 ACSM2AQ08AH3 577 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 ACSM2BQ68CK6 577 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 LINC00299Q6ZSB3 139 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 IGFN1Q86VF2 1251 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 THOC6Q86W42 341 aaKnown RBP21.27■■□□□ 1
NKX2-4-201ENST00000351817 CLECL1Q8IZS7 167 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 SPATA9Q9BWV2 254 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 REEP1Q9H902 201 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 KIF17Q9P2E2 1029 aa21.27■■□□□ 1
NKX2-4-201ENST00000351817 NUP214P35658 2090 aaPredicted RBP21.27■■□□□ 1
NKX2-4-201ENST00000351817 CLDN25C9JDP6 229 aa21.27■□□□□ 0.99
NKX2-4-201ENST00000351817 MRPS14O60783 128 aaKnown RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms