RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 ZIM3Q96PE6 472 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 TMEM216Q9P0N5 145 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 FREM2Q5SZK8 3169 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 WDFY3Q8IZQ1 3526 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 MDC1Q14676 2089 aaKnown RBP13.37□□□□□ -0.27
SEC13-202ENST00000350697 SDK2Q58EX2 2172 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 SEC16AO15027 2179 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 A0A0J9YVX5 310 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 NRP2O60462 931 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 CCNT2O60583 730 aaKnown RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 SRPX2O60687 465 aaPredicted RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 SCRG1O75711 98 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 SASH3O75995 380 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 OR2B3O76000 313 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 GNAZP19086 355 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 CRHR1P34998 444 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 GRK3P35626 688 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 AGTR2P50052 363 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 CCR8P51685 355 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 PCBP4P57723 403 aaKnown RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 CSNK1G2P78368 415 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 SLC18A2Q05940 514 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 CEP85LQ5SZL2 805 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 FBXO42Q6P3S6 717 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 LRRC70Q7Z2Q7 622 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 TMEM126BQ8IUX1 230 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 TMEM151AQ8N4L1 468 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 OR4K1Q8NGD4 311 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 SNIP1Q8TAD8 396 aaKnown RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 SELENOSQ9BQE4 189 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 ULBP3Q9BZM4 244 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 PELI2Q9HAT8 420 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 FAM53CQ9NYF3 392 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 GPRC5BQ9NZH0 403 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 OPTCQ9UBM4 332 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 GRID1Q9ULK0 1009 aa13.36□□□□□ -0.27
SEC13-202ENST00000350697 TMEM184BQ9Y519 407 aaPredicted RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 TNPO3Q9Y5L0 923 aaKnown RBP13.36□□□□□ -0.27
SEC13-202ENST00000350697 ASPMQ8IZT6 3477 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 GOLGA6L10A6NI86 522 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 E7EQ34 232 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 H3BMH7 237 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 STMND1H3BQB6 276 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 STX16-NPEPL1H3BU86 382 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 K7EPI3 171 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 COPEO14579 308 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 STX16O14662 325 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 HAT1O14929 419 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TLX3O43711 291 aaPredicted RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 STK17BO94768 372 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TIAF1O95411 115 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 SBK3P0C264 359 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TAC1P20366 129 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 RPS15AP62244 130 aaKnown RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 PCBP2Q15366 365 aaKnown RBP eCLIP13.35□□□□□ -0.273e-9■■■■■ 55.9
SEC13-202ENST00000350697 PDK4Q16654 411 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TCTE1Q5JU00 501 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 CATSPEREQ5SY80 951 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 FRMPD2BQ6IN97 320 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 METTL2BQ6P1Q9 378 aaKnown RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 C16orf46Q6P387 395 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TLDC1Q6P9B6 456 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 NXPE4Q6UWF7 544 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 TMPRSS11BQ86T26 416 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 SRRM1Q8IYB3 904 aaKnown RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 PTGR2Q8N8N7 351 aaPredicted RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 SNX31Q8N9S9 440 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 ZCCHC14Q8WYQ9 949 aaKnown RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 ZNF285Q96NJ3 590 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 CNTNAP3BQ96NU0 1288 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 SPRTNQ9H040 489 aaPredicted RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 ENAMQ9NRM1 1142 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 IRAK4Q9NWZ3 460 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 SENP1Q9P0U3 644 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 ASB1Q9Y576 335 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 PCDHB3Q9Y5E6 796 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 AP1M2Q9Y6Q5 423 aa13.35□□□□□ -0.27
SEC13-202ENST00000350697 URB1O60287 2271 aaKnown RBP13.35□□□□□ -0.27
SEC13-202ENST00000350697 ANKRD11Q6UB99 2663 aaPredicted RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 LOC105369274A0A096LPK9 316 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 LOC102723532A0A0G2JNH3 316 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 CLGNO14967 610 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 ZSCAN9O15535 394 aaPredicted RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 CPNE3O75131 537 aaKnown RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 KIAA0754O94854 1291 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 DLGAP3O95886 979 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 ZNF28P17035 718 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 VSX2P58304 361 aaPredicted RBP13.34□□□□□ -0.27
SEC13-202ENST00000350697 CCDC153Q494R4 210 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 ATG9BQ674R7 924 aa13.34□□□□□ -0.27
SEC13-202ENST00000350697 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms