RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 DNMT3BQ9UBC3 853 aaKnown RBP11.48□□□□□ -0.57
APP-201ENST00000346798 CAB39Q9Y376 341 aaPredicted RBP11.48□□□□□ -0.57
APP-201ENST00000346798 AIREO43918 545 aa11.48□□□□□ -0.57
APP-201ENST00000346798 DNTTP04053 509 aa11.48□□□□□ -0.57
APP-201ENST00000346798 ITGAMP11215 1152 aa11.48□□□□□ -0.57
APP-201ENST00000346798 FPR1P21462 350 aa11.48□□□□□ -0.57
APP-201ENST00000346798 SERPINB1P30740 379 aa11.48□□□□□ -0.57
APP-201ENST00000346798 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
APP-201ENST00000346798 TUFMP49411 452 aaKnown RBP11.48□□□□□ -0.57
APP-201ENST00000346798 NPRL3Q12980 569 aa11.48□□□□□ -0.57
APP-201ENST00000346798 POM121L1PQ3SYA9 428 aa11.48□□□□□ -0.57
APP-201ENST00000346798 XKR6Q5GH73 641 aa11.48□□□□□ -0.57
APP-201ENST00000346798 LRIF1Q5T3J3 769 aa11.48□□□□□ -0.57
APP-201ENST00000346798 FRG2Q64ET8 278 aa11.48□□□□□ -0.57
APP-201ENST00000346798 PLEKHG7Q6ZR37 379 aa11.48□□□□□ -0.57
APP-201ENST00000346798 YIPF6Q96EC8 236 aa11.48□□□□□ -0.57
APP-201ENST00000346798 FRG2BQ96QU4 278 aa11.48□□□□□ -0.57
APP-201ENST00000346798 DSN1Q9H410 356 aa11.48□□□□□ -0.57
APP-201ENST00000346798 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
APP-201ENST00000346798 KIAA1522Q9P206 1035 aaPredicted RBP11.48□□□□□ -0.57
APP-201ENST00000346798 CCDC88CQ9P219 2028 aa11.48□□□□□ -0.57
APP-201ENST00000346798 UGT8Q16880 541 aa11.48□□□□□ -0.57
APP-201ENST00000346798 HKDC1Q2TB90 917 aa11.48□□□□□ -0.57
APP-201ENST00000346798 RETSATQ6NUM9 610 aa11.48□□□□□ -0.57
APP-201ENST00000346798 FAM180BQ6P0A1 224 aa11.48□□□□□ -0.57
APP-201ENST00000346798 RNF180Q86T96 592 aa11.48□□□□□ -0.57
APP-201ENST00000346798 ZZZ3Q8IYH5 903 aa11.48□□□□□ -0.57
APP-201ENST00000346798 HTATIP2Q9BUP3 242 aa11.48□□□□□ -0.57
APP-201ENST00000346798 ZDHHC6Q9H6R6 413 aa11.48□□□□□ -0.57
APP-201ENST00000346798 TAS2R16Q9NYV7 291 aa11.48□□□□□ -0.57
APP-201ENST00000346798 WBP4O75554 376 aaKnown RBP11.47□□□□□ -0.57
APP-201ENST00000346798 PRPS2P11908 318 aa11.47□□□□□ -0.57
APP-201ENST00000346798 GJA1P17302 382 aa11.47□□□□□ -0.57
APP-201ENST00000346798 RPS3P23396 243 aaKnown RBP eCLIP11.47□□□□□ -0.571e-7■■■□□ 16.4
APP-201ENST00000346798 GADD45AP24522 165 aa11.47□□□□□ -0.57
APP-201ENST00000346798 NSG1P42857 185 aa11.47□□□□□ -0.57
APP-201ENST00000346798 ALDH7A1P49419 539 aaKnown RBP11.47□□□□□ -0.57
APP-201ENST00000346798 IL18R1Q13478 541 aa11.47□□□□□ -0.57
APP-201ENST00000346798 DUOXA1Q1HG43 343 aa11.47□□□□□ -0.57
APP-201ENST00000346798 INO80DQ53TQ3 878 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 DGKKQ5KSL6 1271 aa11.47□□□□□ -0.57
APP-201ENST00000346798 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.47□□□□□ -0.57
APP-201ENST00000346798 SLC7A5P1Q8MH63 180 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
APP-201ENST00000346798 SVOPQ8N4V2 548 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TPT1P8Q9HAU6 139 aa11.47□□□□□ -0.57
APP-201ENST00000346798 NECTIN3Q9NQS3 549 aa11.47□□□□□ -0.57
APP-201ENST00000346798 RAD18Q9NS91 495 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TMEM184CQ9NVA4 438 aa11.47□□□□□ -0.57
APP-201ENST00000346798 POU2F3Q9UKI9 436 aa11.47□□□□□ -0.57
APP-201ENST00000346798 FZD4Q9ULV1 537 aa11.47□□□□□ -0.57
APP-201ENST00000346798 NAALAD2Q9Y3Q0 740 aa11.47□□□□□ -0.57
APP-201ENST00000346798 GNG14A0A1W2PPG7 69 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TTC34A8MYJ7 566 aa11.47□□□□□ -0.57
APP-201ENST00000346798 INPPL1O15357 1258 aa11.47□□□□□ -0.57
APP-201ENST00000346798 AMD1P17707 334 aa11.47□□□□□ -0.57
APP-201ENST00000346798 ALOX12P18054 663 aa11.47□□□□□ -0.57
APP-201ENST00000346798 PSMA3P25788 255 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CRATP43155 626 aa11.47□□□□□ -0.57
APP-201ENST00000346798 AP1S1P61966 158 aa11.47□□□□□ -0.57
APP-201ENST00000346798 B4GALNT1Q00973 533 aa11.47□□□□□ -0.57
APP-201ENST00000346798 KCNC4Q03721 635 aa11.47□□□□□ -0.57
APP-201ENST00000346798 ACSM2AQ08AH3 577 aa11.47□□□□□ -0.57
APP-201ENST00000346798 ACSM2BQ68CK6 577 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CAPN13Q6MZZ7 669 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 TRAF7Q6Q0C0 670 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CRTC1Q6UUV9 634 aa11.47□□□□□ -0.57
APP-201ENST00000346798 PTOV1Q86YD1 416 aa11.47□□□□□ -0.57
APP-201ENST00000346798 ENTHD1Q8IYW4 607 aa11.47□□□□□ -0.57
APP-201ENST00000346798 FAM83FQ8NEG4 500 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 SCAMP4Q969E2 229 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CHCHD6Q9BRQ6 235 aa11.47□□□□□ -0.57
APP-201ENST00000346798 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 KLF16Q9BXK1 252 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 GPR83Q9NYM4 423 aa11.47□□□□□ -0.57
APP-201ENST00000346798 RPS6KA6Q9UK32 745 aa11.47□□□□□ -0.57
APP-201ENST00000346798 SNX8Q9Y5X2 465 aa11.47□□□□□ -0.57
APP-201ENST00000346798 IGHA2P01877 340 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CKMP06732 381 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TGM1P22735 817 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CD40LGP29965 261 aa11.47□□□□□ -0.57
APP-201ENST00000346798 CD70P32970 193 aa11.47□□□□□ -0.57
APP-201ENST00000346798 FAM26DQ5JW98 314 aa11.47□□□□□ -0.57
APP-201ENST00000346798 SYT6Q5T7P8 510 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 CCSAPQ6IQ19 270 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 RGMBQ6NW40 437 aa11.47□□□□□ -0.57
APP-201ENST00000346798 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
APP-201ENST00000346798 MACC1Q6ZN28 852 aa11.47□□□□□ -0.57
APP-201ENST00000346798 HEATR4Q86WZ0 1026 aa11.47□□□□□ -0.57
APP-201ENST00000346798 Q8N9G6 341 aaPredicted RBP11.47□□□□□ -0.57
APP-201ENST00000346798 SCLYQ96I15 445 aa11.47□□□□□ -0.57
APP-201ENST00000346798 FEVQ99581 238 aa11.47□□□□□ -0.57
APP-201ENST00000346798 SLC29A3Q9BZD2 475 aa11.47□□□□□ -0.57
APP-201ENST00000346798 SLIRPQ9GZT3 109 aaKnown RBP11.47□□□□□ -0.57
APP-201ENST00000346798 SMG9Q9H0W8 520 aaKnown RBP11.47□□□□□ -0.57
APP-201ENST00000346798 RLIMQ9NVW2 624 aa11.47□□□□□ -0.57
APP-201ENST00000346798 LINC00854A0A1B0GVQ3 168 aa11.46□□□□□ -0.57
APP-201ENST00000346798 SAP18O00422 153 aaKnown RBP11.46□□□□□ -0.57
APP-201ENST00000346798 AOAHP28039 575 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms