RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PCSK2P16519 638 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 AMD1P17707 334 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PSMB5P28074 263 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PIK3CBP42338 1070 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 CSNK1EP49674 416 aaKnown RBP10.57□□□□□ -0.72
ECM1-201ENST00000346569 STX1BP61266 288 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 UFM1P61960 85 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SLC25A3Q00325 362 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 RPS6KA2Q15349 733 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 MAPRE2Q15555 327 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 ZNF423Q2M1K9 1284 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 KIF19Q2TAC6 998 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PRRT3Q5FWE3 981 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PAGE2BQ5JRK9 111 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 ICE2Q659A1 982 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 ADNP2Q6IQ32 1131 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 CYP20A1Q6UW02 462 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 VN1R5Q7Z5H4 357 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 LONP2Q86WA8 852 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 AMIGO1Q86WK6 493 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 C1orf210Q8IVY1 113 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SFTPA2Q8IWL1 248 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 OR4E2Q8NGC2 313 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 HUS1BQ8NHY5 278 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 LCN9Q8WX39 176 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PATE1Q8WXA2 126 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 UBE2E3Q969T4 207 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SH3KBP1Q96B97 665 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 REPS1Q96D71 796 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 CXorf40BQ96DE9 158 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 APIPQ96GX9 242 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 C1orf50Q9BV19 199 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SLC25A23Q9BV35 468 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 LRRC61Q9BV99 259 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PITHD1Q9GZP4 211 aaPredicted RBP10.57□□□□□ -0.72
ECM1-201ENST00000346569 MIR1-1HGQ9H1L0 117 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 RHBGQ9H310 441 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 EFCAB1Q9HAE3 211 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SIRT5Q9NXA8 310 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 SPHK1Q9NYA1 384 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 NOP53Q9NZM5 478 aaKnown RBP10.57□□□□□ -0.72
ECM1-201ENST00000346569 CPNE7Q9UBL6 633 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 APOBEC3BQ9UH17 382 aaKnown RBP10.57□□□□□ -0.72
ECM1-201ENST00000346569 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
ECM1-201ENST00000346569 PIPSLA2A3N6 862 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 TMEM221A6NGB7 291 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 H7BY64 318 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 M0R296 226 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 BTN3A3O00478 584 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 LCMT2O60294 686 aaKnown RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 NRP2O60462 931 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SLC22A3O75751 556 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 ETHE1O95571 254 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 TBX6O95947 436 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 CHRM5P08912 532 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 PRPS2P11908 318 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 BCKDHAP12694 445 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 ITGAXP20702 1163 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 CXCR2P25025 360 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SHMT2P34897 504 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 PLA2G5P39877 138 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 CCR8P51685 355 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 HNRNPKP61978 463 aaKnown RBP eCLIP10.56□□□□□ -0.72
ECM1-201ENST00000346569 RPL38P63173 70 aaKnown RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 CSNK1G2P78368 415 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 ABATP80404 500 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 MEF2AQ02078 507 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 PGM2L1Q6PCE3 622 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 OGFOD3Q6PK18 319 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 TMIGD1Q6UXZ0 262 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 C17orf82Q86X59 251 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 KRT78Q8N1N4 520 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SDR16C5Q8N3Y7 309 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 FAM46DQ8NEK8 389 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 FLVCR1-AS1Q8TAF5 88 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SLC37A2Q8TED4 501 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 NELL1Q92832 810 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SARGQ9BW04 601 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 MMADHCQ9H3L0 296 aaPredicted RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 POT1Q9NUX5 634 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 TMEM184CQ9NVA4 438 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.56□□□□□ -0.72
ECM1-201ENST00000346569 MAP10Q9P2G4 905 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 ADGRE2Q9UHX3 823 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
ECM1-201ENST00000346569 DLGAP4Q9Y2H0 992 aa10.56□□□□□ -0.72
ECM1-201ENST00000346569 FAM234BA2RU67 622 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 AIM2O14862 343 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 YY2O15391 372 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 HRO43593 1189 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 RASSF9O75901 435 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 VIPP01282 170 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 PCNAP12004 261 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 CAPN3P20807 821 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 JAK1P23458 1154 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 HRH2P25021 359 aa10.55□□□□□ -0.72
ECM1-201ENST00000346569 NME5P56597 212 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms