RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PHKG1Q16816 387 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 FRMPD2BQ6IN97 320 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 ZNF425Q6IV72 752 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 FBXO42Q6P3S6 717 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 LCTLQ6UWM7 567 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 MED25Q71SY5 747 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 OVCH1Q7RTY7 1134 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 OR2Y1Q8NGV0 311 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 NACC2Q96BF6 587 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 FBXL8Q96CD0 374 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 MVB12AQ96EY5 273 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 FER1L6-AS2Q96M78 137 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 PRAP1Q96NZ9 151 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 RBBP8Q99708 897 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 SEMA4CQ9C0C4 833 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 ZNF304Q9HCX3 659 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 ENAMQ9NRM1 1142 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 DYRK1BQ9Y463 629 aa15.07■□□□□ 0
TSPAN4-201ENST00000346501 NBEAQ8NFP9 2946 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 LOC105369274A0A096LPK9 316 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 LOC102723532A0A0G2JNH3 316 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 ARGFXA6NJG6 315 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 CAPN1P07384 714 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 CTSBP07858 339 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 FURINP09958 794 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 HNMTP50135 292 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 IL10RAQ13651 578 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 CSHL1Q14406 222 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 KBTBD12Q3ZCT8 623 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 LACTB2Q53H82 288 aaPredicted RBP15.06■□□□□ 0
TSPAN4-201ENST00000346501 ZDHHC24Q6UX98 284 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 MBOAT1Q6ZNC8 495 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 RAPH1Q70E73 1250 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 OR4N4Q8N0Y3 316 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 FBF1Q8TES7 1133 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 IFT81Q8WYA0 676 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 ABHD17AQ96GS6 310 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 GPR22Q99680 433 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 YIPF2Q9BWQ6 316 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 ING2Q9H160 280 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 WDR54Q9H977 334 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 LRRC4CQ9HCJ2 640 aa15.06■□□□□ 0
TSPAN4-201ENST00000346501 MTO1Q9Y2Z2 717 aaKnown RBP15.06■□□□□ 0
TSPAN4-201ENST00000346501 CXorf49A8MYA2 514 aaPredicted RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 HAT1O14929 419 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 C1QL1O75973 258 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 S100BP04271 92 aaPredicted RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 FBLP22087 321 aaKnown RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 AVPR1BP47901 424 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 CCR8P51685 355 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 GPX6P59796 221 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 ATP6V0D1P61421 351 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 YBX1P67809 324 aaKnown RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 CDKL1Q00532 357 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 SLMAPQ14BN4 828 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 TCTN3Q6NUS6 607 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 MRPL14Q6P1L8 145 aaKnown RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 PRICKLE2Q7Z3G6 844 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 LRRC56Q8IYG6 542 aaPredicted RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 CLEC1AQ8NC01 280 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 CAMKVQ8NCB2 501 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 OR2A5Q96R48 311 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 CYTH2Q99418 400 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 FMO2Q99518 471 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 SGPP1Q9BX95 441 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 DERL2Q9GZP9 239 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 CNOT10Q9H9A5 744 aaKnown RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 SMYD2Q9NRG4 433 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 CUEDC1Q9NWM3 386 aaPredicted RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 ZNF282Q9UDV7 671 aaPredicted RBP15.05■□□□□ -0
TSPAN4-201ENST00000346501 OARD1Q9Y530 152 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 KCNE2Q9Y6J6 123 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 IKBKGQ9Y6K9 419 aa15.05■□□□□ -0
TSPAN4-201ENST00000346501 COL6A6A6NMZ7 2263 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 IGKV1-8A0A0C4DH67 115 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 NPEPPSL1A6NEC2 478 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 KLF7O75840 302 aaPredicted RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 PIAS1O75925 651 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 ONECUT2O95948 504 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 SLC35G6P0C7Q6 338 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CCDC166P0CW27 439 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CDH1P12830 882 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CRABP2P29373 138 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 OR1D4P47884 311 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CCL11P51671 97 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 RAB10P61026 200 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 SKP1P63208 163 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 NFKB2Q00653 900 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 ZNF460Q14592 562 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 TRADDQ15628 312 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 PRTGQ2VWP7 1150 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 IRAK1BP1Q5VVH5 260 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 SBSNQ6UWP8 590 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 CCDC91Q7Z6B0 441 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 TBC1D1Q86TI0 1168 aaPredicted RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 TCAIMQ8N3R3 496 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 METTL27Q8N6F8 245 aaPredicted RBP15.04■□□□□ -0
TSPAN4-201ENST00000346501 OR56A3Q8NH54 315 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 MIEF2Q96C03 454 aa15.04■□□□□ -0
TSPAN4-201ENST00000346501 PYCR2Q96C36 320 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms