RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MT-ND1P03886 318 aa18.89■□□□□ 0.62
HDAC4-201ENST00000345617 ALDH3B2P48448 385 aa18.89■□□□□ 0.62
HDAC4-201ENST00000345617 DENND1AQ8TEH3 1009 aa18.89■□□□□ 0.62
HDAC4-201ENST00000345617 SLC22A18Q96BI1 424 aa18.89■□□□□ 0.62
HDAC4-201ENST00000345617 PI15O43692 258 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 CDKN2CP42773 168 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 MAGEA6P43360 314 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 CHIT1Q13231 466 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 ENPP2Q13822 863 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 C12orf40Q86WS4 652 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 GK3PQ14409 553 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 TMED4Q7Z7H5 227 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 MRI1Q9BV20 369 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 PDGFDQ9GZP0 370 aaPredicted RBP18.89■□□□□ 0.61
HDAC4-201ENST00000345617 OR10A4Q9H209 315 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 GLP1RP43220 463 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 XYLT1Q86Y38 959 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF101Q8IZC7 436 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 RGMAQ96B86 450 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 TMPRSS11EQ9UL52 423 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 RTTNQ86VV8 2226 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 SCN9AQ15858 1988 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 PSMD9O00233 223 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 C1RP00736 705 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 SLC6A9P48067 706 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 SOX9P48436 509 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 DGKGP49619 791 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 PPM1JQ5JR12 505 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 LRIF1Q5T3J3 769 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 TRUB1Q8WWH5 349 aaKnown RBP18.89■□□□□ 0.61
HDAC4-201ENST00000345617 MTG2Q9H4K7 406 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 TRAPPC13A5PLN9 417 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 RGS6P49758 472 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 PIGGQ5H8A4 983 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 KCNC2Q96PR1 638 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 HSPE1-MOB4S4R3N1 261 aa18.89■□□□□ 0.61
HDAC4-201ENST00000345617 MAXP61244 160 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 BCL2A1Q16548 175 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 OR51D1Q8NGF3 324 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 CABIN1Q9Y6J0 2220 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 VSTM5A8MXK1 200 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 INSIG1O15503 277 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 COQ9O75208 318 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 NT5EP21589 574 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 IKBKEQ14164 716 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM53Q6P2H8 277 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 OR56A1Q8NGH5 318 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 TBC1D15Q8TC07 691 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ANKRD63C9JTQ0 380 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 XPNPEP2O43895 674 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 CILPO75339 1184 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 NCBP2P52298 156 aaKnown RBP eCLIP18.88■□□□□ 0.614e-7■■■□□ 17.3
HDAC4-201ENST00000345617 NCS1P62166 190 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 SPIN3Q5JUX0 258 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 TMEM139Q8IV31 216 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ACBD4Q8NC06 268 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ZMIZ2Q8NF64 920 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 TERB2Q8NHR7 220 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 RAB19A4D1S5 217 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 NUDT7P0C024 238 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 EDNRAP25101 427 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ZSCAN1Q8NBB4 408 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 COQ8AQ8NI60 647 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 SULT4A1Q9BR01 284 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ENAMQ9NRM1 1142 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 FAM120CQ9NX05 1096 aaKnown RBP18.88■□□□□ 0.61
HDAC4-201ENST00000345617 PIRTP0C851 137 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 CGREF1Q99674 301 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 FBXL21Q9UKT6 434 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ZNF878C9JN71 531 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
HDAC4-201ENST00000345617 FAM155BO75949 473 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ATAT1Q5SQI0 421 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ANKRD13BQ86YJ7 626 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-201ENST00000345617 GATA5Q9BWX5 397 aaPredicted RBP18.88■□□□□ 0.61
HDAC4-201ENST00000345617 B3GAT2Q9NPZ5 323 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 C13orf42A0A1B0GVH6 325 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 LRRTM2O43300 516 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 MC1RQ01726 317 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 TSTQ16762 297 aaKnown RBP18.88■□□□□ 0.61
HDAC4-201ENST00000345617 CCDC106Q9BWC9 280 aa18.88■□□□□ 0.61
HDAC4-201ENST00000345617 LOC100509620A0A075B734 347 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 FLRT2O43155 660 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 CDH11P55287 796 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 DUOXA1Q1HG43 343 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 MBOAT1Q6ZNC8 495 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 VSIG10LQ86VR7 867 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 CEP97Q8IW35 865 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 AQP11Q8NBQ7 271 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PSD4Q8NDX1 1056 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 COL20A1Q9P218 1284 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PPM1HQ9ULR3 514 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 H3BSA7 217 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 OR2B3O76000 313 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 C1QTNF8P60827 252 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 PTPN20Q4JDL3 420 aa18.87■□□□□ 0.61
HDAC4-201ENST00000345617 EPGNQ6UW88 154 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms