RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 A0A1W2PQU0 124 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 MANBAO00462 879 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 RGS14O43566 566 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 RNGTTO60942 597 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 KRT6AP02538 564 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 KRT6BP04259 564 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 HOXB6P17509 224 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 KRT6CP48668 564 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 HLCSP50747 726 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 CCT8P50990 548 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 ABRAXAS2Q15018 415 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 IRF4Q15306 451 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 SMU1Q2TAY7 513 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 GGTA1PQ4G0N0 100 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 C6orf136Q5SQH8 315 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 DOK6Q6PKX4 331 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 Q6ZSR9 355 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 C11orf96Q7Z7L8 435 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 LRRTM4Q86VH4 590 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 AMZ2Q86W34 360 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 HORMAD1Q86X24 394 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 KLHDC8AQ8IYD2 350 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 OR2T11Q8NH01 316 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 GIPC3Q8TF64 312 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 HSPBAP1Q96EW2 488 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 PPP3R2Q96LZ3 170 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 BDH2Q9BUT1 245 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 WDR26Q9H7D7 661 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 MBNL1Q9NR56 388 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 KLQ9UEF7 1012 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 AURKCQ9UQB9 309 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 SLC22A14Q9Y267 594 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 GPR45Q9Y5Y3 372 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3DA0A087WVF3 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3IA0A087WXS9 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3EA0A087X179 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3KA0A087X1G2 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3FA6NER0 549 aaPredicted RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3LB9A6J9 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 KMOO15229 486 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 UGDHO60701 494 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 C1orf105O95561 183 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3HP0C7X1 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 ACADMP11310 421 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 CKMT2P17540 419 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 EPORP19235 508 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 ENTPD1P49961 510 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 HTR6P50406 440 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 ADPRHP54922 357 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 EEFSECP57772 596 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 PFN3P60673 137 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 EMX2Q04743 252 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 EPS8Q12929 822 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 FGL2Q14314 439 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3GQ6DHY5 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3CQ6IPX1 549 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 AGTRAPQ6RW13 159 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TRIM46Q7Z4K8 759 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 PTRH1Q86Y79 214 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 TBC1D3Q8IZP1 549 aaPredicted RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 SFRP1Q8N474 314 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 L3MBTL4Q8NA19 623 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 TRUB1Q8WWH5 349 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 ASB12Q8WXK4 309 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 PYCR2Q96C36 320 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 PKP4Q99569 1192 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 LGR4Q9BXB1 951 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 BRINP2Q9C0B6 783 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 ATG10Q9H0Y0 220 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 RPF2Q9H7B2 306 aaKnown RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 AIG1Q9NVV5 245 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 STOX2Q9P2F5 926 aaPredicted RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 ZNF490Q9ULM2 529 aaPredicted RBP12.41□□□□□ -0.42
CLK3-201ENST00000345005 SNX6Q9UNH7 406 aa12.41□□□□□ -0.42
CLK3-201ENST00000345005 PRR23AA6NEV1 266 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 FFAR3O14843 346 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 GPR42O15529 346 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 LDLRP01130 860 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 BDKRB1P46663 353 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 MAD2L1Q13257 205 aaPredicted RBP12.4□□□□□ -0.42
CLK3-201ENST00000345005 NR6A1Q15406 480 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 ISLR2Q6UXK2 745 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 UNC5DQ6UXZ4 953 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 THOC6Q86W42 341 aaKnown RBP12.4□□□□□ -0.42
CLK3-201ENST00000345005 FUNDC1Q8IVP5 155 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 OXR1Q8N573 874 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 FNDC5Q8NAU1 212 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 OR56A3Q8NH54 315 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 RPLP0P6Q8NHW5 317 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 FAM3CQ92520 227 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 KLK6Q92876 244 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 USP7Q93009 1102 aa12.4□□□□□ -0.42
CLK3-201ENST00000345005 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
CLK3-201ENST00000345005 PAIP1Q9H074 479 aaKnown RBP12.4□□□□□ -0.42
CLK3-201ENST00000345005 GIN1Q9NXP7 522 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms