RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ZNF717Q9BY31 904 aaPredicted RBP7.59□□□□□ -1.19
KPNA1-201ENST00000344337 C1orf109Q9NX04 203 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 ZSCAN32Q9NX65 697 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 VAPAQ9P0L0 249 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 ZCWPW2A0A1B0GU75 182 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 BBIP1A8MTZ0 92 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 J3KTA2 159 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 SLC1A7O00341 560 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 OR1F1O43749 312 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 NCR1O76036 304 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 C6orf47O95873 294 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 URODP06132 367 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 DBIP07108 87 aaKnown RBP7.59□□□□□ -1.19
KPNA1-201ENST00000344337 DHRS4L1P0CG22 281 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 CSTF2P33240 577 aaKnown RBP eCLIP7.59□□□□□ -1.19
KPNA1-201ENST00000344337 SSR2P43308 183 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 ZNF132P52740 706 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 CDC42EP1Q00587 391 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 NDUFAF6Q330K2 333 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 RPS26P11Q5JNZ5 115 aaPredicted RBP7.59□□□□□ -1.19
KPNA1-201ENST00000344337 C15orf39Q6ZRI6 1047 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 LINGO2Q7L985 606 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 LINC00471Q8N535 108 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 ROPN1LQ96C74 230 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 PYURFQ96I23 114 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 OSBPL2Q9H1P3 480 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 PRKAG2Q9UGJ0 569 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 BCL9LQ86UU0 1499 aa7.59□□□□□ -1.19
KPNA1-201ENST00000344337 FAM234BA2RU67 622 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 KIAA0513O60268 411 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 GABRB3P28472 473 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 SSTR2P30874 369 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ARHGDIBP52566 201 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ERVPABLB-1P60509 514 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ENPEPQ07075 957 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CLCA4Q14CN2 919 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 NNATQ16517 81 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TYSND1Q2T9J0 566 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 DCST1Q5T197 706 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TMEM220Q6QAJ8 160 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PLCZ1Q86YW0 608 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ATP13A3Q9H7F0 1226 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 NLKQ9UBE8 527 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PCDHGA10Q9Y5H3 936 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CTDSP2O14595 271 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 FRS3O43559 492 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 SCO1O75880 301 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CATP04040 527 aaKnown RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 FYNP06241 537 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CELP19835 753 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ARHGAP1Q07960 439 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ELP6Q0PNE2 266 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 KCNJ8Q15842 424 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CRB2Q5IJ48 1285 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ISCA2Q86U28 154 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 YAF2Q8IY57 180 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 FAM98AQ8NCA5 519 aaKnown RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 OR8S1Q8NH09 359 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 BTN2A3PQ96KV6 586 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ASPNQ9BXN1 380 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 RNF32Q9H0A6 362 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PRDM9Q9NQV7 894 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 STOX2Q9P2F5 926 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 DKK3Q9UBP4 350 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 IKZF2Q9UKS7 526 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 HTR3EA5X5Y0 456 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 IRAK2O43187 625 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 SMIM18P0DKX4 95 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 SLC2A2P11168 524 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 MAPK12P53778 367 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 HOXC5Q00444 222 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PPIL2Q13356 520 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 E2F2Q14209 437 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 GPR68Q15743 365 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TRIM71Q2Q1W2 868 aaKnown RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 NIPAL1Q6NVV3 410 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 IL20RBQ6UXL0 311 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 SERPINA13PQ6UXR4 307 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CMTM8Q8IZV2 173 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TOP6BLQ8N6T0 577 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 OR5K1Q8NHB7 308 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 DNAJB8Q8NHS0 232 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 ZNF675Q8TD23 568 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CCM2LQ9NUG4 571 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PCDHB8Q9UN66 801 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PLK4O00444 970 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PDYNP01213 254 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 COL6A2P12110 1019 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 PORP16435 677 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 CRYBB1P53674 252 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 RPS13P62277 151 aaKnown RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 LEXMQ3ZCV2 418 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 INTS11Q5TA45 600 aaKnown RBP7.58□□□□□ -1.2
KPNA1-201ENST00000344337 Q6ZVU0 165 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 RNF130Q86XS8 419 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TMEM86AQ8N2M4 240 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 TRIB2Q92519 343 aa7.58□□□□□ -1.2
KPNA1-201ENST00000344337 IL17FQ96PD4 163 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms