RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CHD5Q8TDI0 1954 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 S1PR1P21453 382 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 MATN1P21941 496 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 ARL11Q969Q4 196 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 MYPNQ86TC9 1320 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 C2orf92A0A1B0GVN3 265 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 KHNYNO15037 678 aaKnown RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 STK17BO94768 372 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 ETFAP13804 333 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 BEST3Q8N1M1 668 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 TATDN2Q93075 761 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 BTF3L4Q96K17 158 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 OSER1Q9NX31 292 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 KLRF1Q9NZS2 232 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 DKKL1Q9UK85 242 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 USP6P35125 1406 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 NDUFV1P49821 464 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 SLC43A2Q8N370 569 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 YTHDF1Q9BYJ9 559 aaKnown RBP17.22■□□□□ 0.35
SMAD4-201ENST00000342988 PLLPQ9Y342 182 aa17.22■□□□□ 0.35
SMAD4-201ENST00000342988 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TPRP12270 2363 aaKnown RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 OR52E4Q8NGH9 312 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 OR5K1Q8NHB7 308 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TRIB2Q92519 343 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 SLC25A36Q96CQ1 311 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 SRMSQ9H3Y6 488 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 DNAJC18Q9H819 358 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 NANSQ9NR45 359 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TAS2R8Q9NYW2 309 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 XPNPEP2O43895 674 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 SYNGR4O95473 234 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 HLA-DPB1P04440 258 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF45Q02386 682 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 LIN52Q52LA3 116 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TPRG1LQ5T0D9 272 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 ANKRD52Q8NB46 1076 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 HECW2Q9P2P5 1572 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 BACE1P56817 501 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 HABP2Q14520 560 aaPredicted RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 GID4Q8IVV7 300 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 POU2F3Q9UKI9 436 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 CYP8B1Q9UNU6 501 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 RNF215Q9Y6U7 377 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 MYO7AQ13402 2215 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 JUNP05412 331 aaKnown RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 C8BP07358 591 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 EXOSC6Q5RKV6 272 aaKnown RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 GSG1LQ6UXU4 331 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TTYH2Q9BSA4 534 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 FTCDNL1E5RQL4 147 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 E7ESA3 106 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 OC90Q02509 493 aaPredicted RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 PDZD9Q8IXQ8 264 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 OR8S1Q8NH09 359 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 FAM86C1Q9NVL1 165 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 ABRACLQ9P1F3 81 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 SULT1C2O00338 296 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 CXCR6O00574 342 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 PRNPP04156 253 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF84P51523 738 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 TAS2R20P59543 309 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 ANKDD1AQ495B1 522 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 RALGPS1Q5JS13 557 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 MAELQ96JY0 434 aaKnown RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
SMAD4-201ENST00000342988 DHX33Q9H6R0 707 aaKnown RBP17.21■□□□□ 0.35
SMAD4-201ENST00000342988 MAP1BP46821 2468 aaKnown RBP17.21■□□□□ 0.34
SMAD4-201ENST00000342988 ANKRD28O15084 1053 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 BTBD16Q32M84 506 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 OR4K17Q8NGC6 315 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RNF128Q8TEB7 428 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ZDHHC12Q96GR4 267 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SECISBP2Q96T21 854 aaKnown RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 IL12RB2Q99665 862 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ICAM3P32942 547 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 HLFQ16534 295 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 C14orf28Q4W4Y0 310 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM246Q9BRR3 403 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SLC6A16Q9GZN6 736 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 NT5C1B-RDH14C9J2C7 533 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 BHLHE40O14503 412 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 KCNC1P48547 511 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 EXOC3L2Q2M3D2 409 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF181Q2M3W8 571 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RAB41Q5JT25 222 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 GK5Q6ZS86 529 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 TRAPPC6BQ86SZ2 158 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 TVP23BQ9NYZ1 205 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 LACTBL1A8MY62 500 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 DNAJB6O75190 326 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RCBTB1Q8NDN9 531 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 C7orf57Q8NEG2 295 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 HSFY1Q96LI6 401 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms