RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CYP27C1Q4G0S4 372 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 CRTC2Q53ET0 693 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-202ENST00000342494 PIK3R3Q92569 461 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 NODALQ96S42 347 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 MGAT4AQ9UM21 535 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OR1I1O60431 355 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 FHP07954 510 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 GP1BBP13224 206 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 PDHA2P29803 388 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 SHMT2P34897 504 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OR3A3P47888 321 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OR3A2P47893 321 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 PTCHD3Q3KNS1 767 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 Q6ZVL8 140 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 UTS2BQ765I0 119 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OR2M4Q96R27 311 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 DNAJB9Q9UBS3 223 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 FAM172BPA6NC97 362 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 A8MT66 165 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 AHCYL1O43865 530 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 LEFTY1O75610 366 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 NANOGNBQ7Z5D8 188 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 PIM3Q86V86 326 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 GPALPP1Q8IXQ4 340 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 FEM1AQ9BSK4 669 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 GPR174Q9BXC1 333 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ASPNQ9BXN1 380 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF717Q9BY31 904 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-202ENST00000342494 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 SLC10A3P09131 477 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 C8orf89P0DMQ9 161 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 CREB5Q02930 508 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM115Q12893 351 aaPredicted RBP14.6□□□□□ -0.07
UBE3B-202ENST00000342494 KIAA1161Q6NSJ0 714 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 TRIM74Q86UV6 250 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OR10G2Q8NGC3 310 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF358Q9NW07 568 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 OXSMQ9NWU1 459 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 RAB26Q9ULW5 256 aa14.6□□□□□ -0.07
UBE3B-202ENST00000342494 A0A1W2PP55 124 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 AIREO43918 545 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CFHP08603 1231 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CHRM5P08912 532 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PRPF38BQ5VTL8 546 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF598Q86UK7 904 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 TMEM139Q8IV31 216 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 NAT8LQ8N9F0 302 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 OR56A1Q8NGH5 318 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 OR52E4Q8NGH9 312 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 OR5K1Q8NHB7 308 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 UPB1Q9UBR1 384 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 FETUBQ9UGM5 382 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 AJAP1Q9UKB5 411 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ACSL5Q9ULC5 683 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CA14Q9ULX7 337 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 RPL36Q9Y3U8 105 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PCDHGB1Q9Y5G3 927 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 LOC730098B7Z3J9 87 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 AHSA1O95433 338 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 GKP32189 559 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 XKP51811 444 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 HSF2Q03933 536 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 E2F2Q14209 437 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF805Q5CZA5 627 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CCDC80Q76M96 950 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ARHGAP22Q7Z5H3 698 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ZNF641Q96N77 438 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 STOML2Q9UJZ1 356 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 FKBP7Q9Y680 259 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 A6NCN8 305 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 C2orf74A8MZ97 194 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 AXIN1O15169 862 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 NOBOXO60393 691 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 MAGP20916 626 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PAFAH1B3Q15102 231 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CNDP2Q96KP4 475 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 OR51B5Q9H339 312 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 TAS2R7Q9NYW3 318 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 TBC1D24Q9ULP9 559 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PGRP06401 933 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 GALNT2Q10471 571 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 SUSD1Q6UWL2 747 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 P2RY8Q86VZ1 359 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CMTR2Q8IYT2 770 aaKnown RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 RAB7BQ96AH8 199 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 MMABQ96EY8 250 aaPredicted RBP14.59□□□□□ -0.07
UBE3B-202ENST00000342494 WDR92Q96MX6 357 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 SLC39A3Q9BRY0 314 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 SQORQ9Y6N5 450 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 HEPACAM2A8MVW5 462 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 TNFRSF10BO14763 440 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 IQCF3P0C7M6 154 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 GDF5P43026 501 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CAPZA1P52907 286 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 PUDPQ08623 228 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 ARFRP1Q13795 201 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 CYP1B1Q16678 543 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 SERINC5Q86VE9 423 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 NECTIN4Q96NY8 510 aa14.59□□□□□ -0.07
UBE3B-202ENST00000342494 IL21RQ9HBE5 538 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms