RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SPANXN3Q5MJ09 141 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FAM205BPQ63HN1 556 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 DUPD1Q68J44 220 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ZNF470Q6ECI4 717 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 PRSS42Q7Z5A4 293 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 IGDCC3Q8IVU1 814 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 CNTN4Q8IWV2 1026 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FBXO39Q8N4B4 442 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ACVR1CQ8NER5 493 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 NCSTNQ92542 709 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FAM167BQ9BTA0 163 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 THSD1Q9NS62 852 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 GRHL1Q9NZI5 618 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 IL1RAPL1Q9NZN1 696 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FBXL7Q9UJT9 491 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 A0A087WV48 116 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 OR5K3A6NET4 321 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 SRRM3A6NNA2 597 aaPredicted RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 IQCF5A8MTL0 148 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FAM47E-STBD1D6RA91 191 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FRS3O43559 492 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 SLCO2B1O94956 709 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 AMY2AP04746 511 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 IFNGR1P15260 489 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 AMD1P17707 334 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 AMY2BP19961 511 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ADH7P40394 386 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ETV5P41161 510 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 SLC1A2P43004 574 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 NR1H2P55055 460 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 SYTL3Q4VX76 610 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 PTRHD1Q6GMV3 140 aaKnown RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 GALNT7Q86SF2 657 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 KCNMB4Q86W47 210 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 KRT222Q8N1A0 295 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 OTUD6BQ8N6M0 293 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 BMPERQ8N8U9 685 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 AGBL5Q8NDL9 886 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 ASZ1Q8WWH4 475 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 TFGQ92734 400 aaPredicted RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 FGF11Q92914 225 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 C9orf72Q96LT7 481 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 KCNJ15Q99712 375 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 FUT8Q9BYC5 575 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 TRIM31Q9BZY9 425 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 TFB2MQ9H5Q4 396 aaKnown RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 SIDT1Q9NXL6 827 aaKnown RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 AKAP7Q9P0M2 348 aaPredicted RBP9.94□□□□□ -0.82
TPM3-207ENST00000341372 SNX24Q9Y343 169 aa9.94□□□□□ -0.82
TPM3-207ENST00000341372 UBA6A0AVT1 1052 aaPredicted RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 CCDC154A6NI56 674 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 TNFSF15O95150 251 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 HGFP14210 728 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ITIH1P19827 911 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 RBMS1P29558 406 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 ATP5DP30049 168 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ELK3P41970 407 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 EIF3BP55884 814 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 THOC5Q13769 683 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 TMED2Q15363 201 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.93□□□□□ -0.82
TPM3-207ENST00000341372 C3orf36Q3SXR2 165 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ZNF789Q5FWF6 425 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 PLEKHS1Q5SXH7 462 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 VRK3Q8IV63 474 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 DENND6AQ8IWF6 608 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 GSPT2Q8IYD1 628 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 TBC1D21Q8IYX1 336 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 OR5K2Q8NHB8 316 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ISL2Q96A47 359 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 PWWP2AQ96N64 755 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 CD180Q99467 661 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 UNKQ9C0B0 810 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ZNF768Q9H5H4 540 aaKnown RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 C20orf96Q9NUD7 363 aaPredicted RBP9.93□□□□□ -0.82
TPM3-207ENST00000341372 PISDQ9UG56 409 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 FBXO5Q9UKT4 447 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 RAXQ9Y2V3 346 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 MED16Q9Y2X0 877 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 PTPRQQ9UMZ3 2332 aa9.93□□□□□ -0.82
TPM3-207ENST00000341372 EIF3HO15372 352 aaKnown RBP eCLIP9.92□□□□□ -0.82
TPM3-207ENST00000341372 NVLO15381 856 aaKnown RBP9.92□□□□□ -0.82
TPM3-207ENST00000341372 APOA4P06727 396 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 FGF3P11487 239 aaPredicted RBP9.92□□□□□ -0.82
TPM3-207ENST00000341372 CCL4P13236 92 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 PKMP14618 531 aaKnown RBP9.92□□□□□ -0.82
TPM3-207ENST00000341372 ITGB6P18564 788 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 CSTF2P33240 577 aaKnown RBP eCLIP9.92□□□□□ -0.82
TPM3-207ENST00000341372 EIF2S3P41091 472 aaKnown RBP9.92□□□□□ -0.82
TPM3-207ENST00000341372 LEPRP48357 1165 aaKnown RBP9.92□□□□□ -0.82
TPM3-207ENST00000341372 CTBP1Q13363 440 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 PLCL1Q15111 1095 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 UNC5DQ6UXZ4 953 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 NAPRTQ6XQN6 538 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 OOSP2Q86WS3 158 aa9.92□□□□□ -0.82
TPM3-207ENST00000341372 CXorf67Q86X51 503 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms