RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CSNK1DP48730 415 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 NTHL1P78549 312 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 NFATC2Q13469 925 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 RBBP7Q16576 425 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 PLA2G4EQ3MJ16 856 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 COLEC12Q5KU26 742 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.23■□□□□ 0.51
PSPC1-201ENST00000338910 ASTLQ6HA08 431 aaPredicted RBP18.23■□□□□ 0.51
PSPC1-201ENST00000338910 DESI1Q6ICB0 168 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 CERS6Q6ZMG9 384 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 GPRIN3Q6ZVF9 776 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 HIPK1Q86Z02 1210 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 CLPBQ9H078 707 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 IKZF5Q9H5V7 419 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 U3KQV3 271 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 CEP290O15078 2479 aa18.23■□□□□ 0.51
PSPC1-201ENST00000338910 EFCAB9A8MZ26 197 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 OR4F21O95013 312 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 TRIM16O95361 564 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CD9P21926 228 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 VAC14Q08AM6 782 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 GBX1Q14549 363 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 ZNF404Q494X3 552 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CES5AQ6NT32 575 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CDYL2Q8N8U2 506 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 DCBLD1Q8N8Z6 715 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 OR56A4Q8NGH8 313 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 MYLIPQ8WY64 445 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 FAM162AQ96A26 154 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 LMLNQ96KR4 655 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 DCSTAMPQ9H295 470 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 LINC00597Q9H2U6 94 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 SCN3BQ9NY72 215 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 DHRS7Q9Y394 339 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 PRSS21Q9Y6M0 314 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 MN1Q10571 1320 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 ELOVL7A1L3X0 281 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 NPIPB15A6NHN6 443 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CXCR6O00574 342 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 SOCS5O75159 536 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CD36P16671 472 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 ZNF7P17097 686 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 EPHA5P54756 1037 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 COPZ1P61923 177 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 SNRPD1P62314 119 aaKnown RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CYP4F3Q08477 520 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 KIAA0040Q15053 153 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 PON2Q15165 354 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CHRNA6Q15825 494 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 CAPN13Q6MZZ7 669 aaPredicted RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 USP43Q70EL4 1123 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 SLC22A15Q8IZD6 547 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 DCAF13Q9NV06 445 aaKnown RBP18.22■□□□□ 0.51
PSPC1-201ENST00000338910 COMMD10Q9Y6G5 202 aa18.22■□□□□ 0.51
PSPC1-201ENST00000338910 METTL15A6NJ78 407 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 GRXCR1A8MXD5 290 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 AREL1O15033 823 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 RGS10O43665 173 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 SCELO95171 688 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 MSH3P20585 1137 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 IGFBP5P24593 272 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 SNX20Q7Z614 316 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 GALNT5Q7Z7M9 940 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 CYP4Z1Q86W10 505 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 FAM83FQ8NEG4 500 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-201ENST00000338910 VOPP1Q96AW1 172 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 THUMPD3Q9BV44 507 aaKnown RBP18.21■□□□□ 0.51
PSPC1-201ENST00000338910 BBS2Q9BXC9 721 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 EPS8L2Q9H6S3 715 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 MAGIXQ9H6Y5 334 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 TDP1Q9NUW8 608 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 HCFC2Q9Y5Z7 792 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 HSPE1-MOB4S4R3N1 261 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 GBF1Q92538 1859 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 GLYATL1P3A0A0U1RQE8 302 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 OR2A25A4D2G3 310 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 RAD51BO15315 384 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 TPD52L2O43399 206 aaKnown RBP18.21■□□□□ 0.51
PSPC1-201ENST00000338910 ITGALP20701 1170 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 CLK3P49761 638 aaKnown RBP18.21■□□□□ 0.51
PSPC1-201ENST00000338910 TUBA1BP68363 451 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 LRRC73Q5JTD7 316 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 TUBA1AQ71U36 451 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 ATL1Q8WXF7 558 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 DHRS1Q96LJ7 313 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 ABCG8Q9H221 673 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 EIF2B4Q9UI10 523 aaKnown RBP18.21■□□□□ 0.51
PSPC1-201ENST00000338910 PCDHB1Q9Y5F3 818 aa18.21■□□□□ 0.51
PSPC1-201ENST00000338910 NOTCH4Q99466 2003 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 GUCY1B2O75343 617 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 SLC25A14O95258 325 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 RETP07949 1114 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 NRIP1P48552 1158 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 KEAP1Q14145 624 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 SIM2Q14190 667 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 C18orf21Q32NC0 220 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-201ENST00000338910 CRTC1Q6UUV9 634 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 DPY19L3Q6ZPD9 716 aa18.2■□□□□ 0.5
PSPC1-201ENST00000338910 DET1Q7L5Y6 550 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms