RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KMOO15229 486 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 UGT2B17O75795 530 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 DIRAS1O95057 198 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PDYNP01213 254 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PRLP01236 227 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SRPRAP08240 638 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GPX3P22352 226 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RAB8AP61006 207 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PIGGQ5H8A4 983 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 KLHL35Q6PF15 583 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 BHLHA9Q7RTU4 235 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 HEATR4Q86WZ0 1026 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR8J3Q8NGG0 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 BRINP2Q9C0B6 783 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 FBXL12Q9NXK8 326 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MROH6A6NGR9 719 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CACNG3O60359 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 HSD17B1P14061 328 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MEF2AQ02078 507 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 DUOXA1Q1HG43 343 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 HLA-DQA1Q5Y7H0 255 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR2T5Q6IEZ7 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR2T29Q8NH02 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 IL17FQ96PD4 163 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 EPB41L1Q9H4G0 881 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PLAC1Q9HBJ0 212 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 DNMT3BQ9UBC3 853 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 BMP7P18075 431 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MYL12AP19105 171 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RGS8P57771 180 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 LETMD1Q6P1Q0 360 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SAMD11Q96NU1 681 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 H3BNX3 289 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 BCKDKO14874 412 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ANXA8P13928 327 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NR4A1P22736 598 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CDH12P55289 794 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DOC2AQ14183 400 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ELAVL3Q14576 367 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 COQ5Q5HYK3 327 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DCST1Q5T197 706 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ARMC8Q8IUR7 673 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SHKBP1Q8TBC3 707 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 WFDC5Q8TCV5 224 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MYDGFQ969H8 173 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ABHD8Q96I13 439 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DOCK2Q92608 1830 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 A0A1B0GUL6 1792 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MAN1A2O60476 641 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 KAT7O95251 611 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AKT2P31751 481 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RPS6KA3P51812 740 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 UGT2B15P54855 530 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TAS2R50P59544 299 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 GRSF1Q12849 480 aaKnown RBP eCLIP6.1□□□□□ -1.437e-12■■■■■ 62.7
PRKDC-202ENST00000338368 LRP8Q14114 963 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MED22Q15528 200 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PPP4R4Q6NUP7 873 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TICAM1Q8IUC6 712 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 LMLNQ96KR4 655 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 OGDHLQ9ULD0 1010 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MRPS33Q9Y291 106 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NUAK1O60285 661 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MED26O95402 600 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 KLK1P06870 262 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 C6P13671 934 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NDUFS1P28331 727 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 HTR1EP28566 365 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 KRR1Q13601 381 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TNFAIP8L2Q6P589 184 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FAM129CQ86XR2 697 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PRSS21Q9Y6M0 314 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FADS2P1A8MWK0 482 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 KCTD8Q6ZWB6 473 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ISG20Q96AZ6 181 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RDH14Q9HBH5 336 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MRPS17Q9Y2R5 130 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RASGRP1O95267 797 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NADKO95544 446 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 BCHEP06276 602 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 POU2F1P14859 743 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CR2P20023 1033 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 HOXC8P31273 242 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ADARP55265 1226 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CLDN8P56748 225 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ITGADQ13349 1161 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 GOLM1Q8NBJ4 401 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 OR4K1Q8NGD4 311 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TCEAL4Q96EI5 215 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SLC35G5Q96KT7 338 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NUAK2Q9H093 628 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FANCEQ9HB96 536 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AMBNQ9NP70 447 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SNX7Q9UNH6 387 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 A0A096LPI6 279 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FAM92AA1XBS5 289 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 H3BSA7 217 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TRIM24O15164 1050 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 IGLV3-27P01718 113 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms