RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 STMN3Q9NZ72 180 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 MKL2Q9ULH7 1088 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 ZNF835Q9Y2P0 537 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 PCDHGB6Q9Y5F9 930 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 A0A0U1RQJ8 604 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 CD3EAPO15446 510 aaKnown RBP10.89□□□□□ -0.67
CSMD2-202ENST00000338325 FOXS1O43638 330 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 WISP2O76076 250 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 MLYCDO95822 493 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 C8orf89P0DMQ9 161 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 ERGP11308 486 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 CAPN3P20807 821 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 RPS3P23396 243 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSMD2-202ENST00000338325 FDFT1P37268 417 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 EFNA3P52797 238 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 SYT16Q17RD7 645 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 LRRC8BQ6P9F7 803 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-202ENST00000338325 ARHGEF39Q8N4T4 335 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 AMER2Q8N7J2 671 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 LRRC57Q8N9N7 239 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 ADAMTS18Q8TE60 1221 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 THAP3Q8WTV1 239 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-202ENST00000338325 METTL21AQ8WXB1 218 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 RERGQ96A58 199 aaPredicted RBP10.89□□□□□ -0.67
CSMD2-202ENST00000338325 C14orf79Q96F83 325 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 GPR137Q96N19 417 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 DUSP10Q9Y6W6 482 aa10.89□□□□□ -0.67
CSMD2-202ENST00000338325 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 A0A0A6YYC8 382 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 IGKV1-8A0A0C4DH67 115 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 GRID2IPA4D2P6 1211 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 E7EVH7 732 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 FAM227AF5H4B4 570 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 I3L1I5 382 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 TXNDC9O14530 226 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 TTI1O43156 1089 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 SEC24DO94855 1032 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 MATN4O95460 622 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 CYC1P08574 325 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 EZRP15311 586 aaKnown RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 RPA3P35244 121 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 KIR3DL1P43629 444 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 EIF3BP55884 814 aaKnown RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 MAT1AQ00266 395 aaKnown RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 CDSNQ15517 529 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 BTBD16Q32M84 506 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 PLAG1Q6DJT9 500 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 SUSD1Q6UWL2 747 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 SPNS3Q6ZMD2 512 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 CDH24Q86UP0 819 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 SPPL2CQ8IUH8 684 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 CEP97Q8IW35 865 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 BEST3Q8N1M1 668 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 MPP5Q8N3R9 675 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 UBL4BQ8N7F7 174 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 OR9A1PQ8NGU1 263 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 SMPDL3AQ92484 453 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 ZNF354BQ96LW1 612 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 UTP6Q9NYH9 597 aaKnown RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 C19orf25Q9UFG5 118 aaPredicted RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 PCYOX1Q9UHG3 505 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 TSR3Q9UJK0 312 aaKnown RBP10.88□□□□□ -0.67
CSMD2-202ENST00000338325 AMFRQ9UKV5 643 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 MEMO1Q9Y316 297 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 GTF3C1Q12789 2109 aa10.88□□□□□ -0.67
CSMD2-202ENST00000338325 IGHV3-20A0A0C4DH32 117 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 TCRBV7S2A1N4TA0A589 114 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 A8MUI8 341 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 P2RX6O15547 441 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 NDUFS3O75489 264 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 CCNDBP1O95273 360 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 PKMP14618 531 aaKnown RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ATP5DP30049 168 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 STIP1P31948 543 aaKnown RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 AVPR1BP47901 424 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ALDH6A1Q02252 535 aaKnown RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 TSTA3Q13630 321 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 TUBA3CQ13748 450 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 FAM53BQ14153 422 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 GBX1Q14549 363 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 NDUFA9Q16795 377 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ANKRD20A4Q4UJ75 823 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 CTSL3PQ5NE16 218 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ACER2Q5QJU3 275 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ICE2Q659A1 982 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 FCRLBQ6BAA4 426 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 ZNF425Q6IV72 752 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 H3F3CQ6NXT2 135 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 TUBA3EQ6PEY2 450 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 LANCL3Q6ZV70 420 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 PEX26Q7Z412 305 aa10.87□□□□□ -0.67
CSMD2-202ENST00000338325 CPEB2Q7Z5Q1 589 aaKnown RBP10.87□□□□□ -0.67
CSMD2-202ENST00000338325 MDS2Q8NDY4 140 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms