RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 C1orf109Q9NX04 203 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 GALPQ9UBC7 116 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 SEC14L3Q9UDX4 400 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 STRCQ7RTU9 1775 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 FADS2P1A8MWK0 482 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 NFKBIEO00221 500 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 POLR2IP36954 125 aaKnown RBP15.65■□□□□ 0.1
NPHP3-201ENST00000337331 MAZP56270 477 aaKnown RBP15.65■□□□□ 0.1
NPHP3-201ENST00000337331 EEFSECP57772 596 aaKnown RBP15.65■□□□□ 0.1
NPHP3-201ENST00000337331 CHRNEQ04844 493 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 INCA1Q0VD86 236 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 MPPE1Q53F39 396 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 RNASE12Q5GAN4 147 aaKnown RBP15.65■□□□□ 0.1
NPHP3-201ENST00000337331 HLA-DQA1Q5Y7H0 255 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 FAM92BQ6ZTR7 304 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 ZDHHC21Q8IVQ6 265 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 CSGALNACT1Q8TDX6 532 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 PTERQ96BW5 349 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 TCF25Q9BQ70 676 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 SPATA9Q9BWV2 254 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 EBPLQ9BY08 206 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 TFB2MQ9H5Q4 396 aaKnown RBP15.65■□□□□ 0.1
NPHP3-201ENST00000337331 CD84Q9UIB8 345 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 EDARQ9UNE0 448 aa15.65■□□□□ 0.1
NPHP3-201ENST00000337331 H7C2Y5 167 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 TNFRSF11BO00300 401 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CXCL14O95715 111 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 S100A6P06703 90 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 ACLYP53396 1101 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 AP1S1P61966 158 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 RPS14P62263 151 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FBXL22Q6P050 247 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 GALNT13Q8IUC8 556 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CHPFQ8IZ52 775 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 TXNDC5Q8NBS9 432 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 NPY6RQ99463 290 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 OSBPL2Q9H1P3 480 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CMTM6Q9NX76 183 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 INTS6Q9UL03 887 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CXCR6O00574 342 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FABP3P05413 133 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 PROS1P07225 676 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 GGT5P36269 586 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 MLLT6P55198 1093 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 ERVK-8P63133 956 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 HMGCS1Q01581 520 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 BIKQ13323 160 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 UGT8Q16880 541 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CHDHQ8NE62 594 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 ANKRD49Q8WVL7 239 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 C17orf62Q9BQA9 187 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 SLITRK2Q9H156 845 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 IGFLR1Q9H665 355 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 IMP3Q9NV31 184 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 KNL1Q8NG31 2342 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 WWP2O00308 870 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 SLC2A2P11168 524 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CD72P21854 359 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CDH5P33151 784 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 EIF2DP41214 584 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 DCDC1P59894 354 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 DSTNP60981 165 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CATSPEREQ5SY80 951 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 MZT2AQ6P582 158 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 ADGRD2Q7Z7M1 963 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 ARL14EPQ8N8R7 260 aaPredicted RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 KDM1BQ8NB78 822 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 AP2M1Q96CW1 435 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FUBP3Q96I24 572 aaKnown RBP eCLIP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 NCKAP1Q9Y2A7 1128 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 MAP4K5Q9Y4K4 846 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 PARP4Q9UKK3 1724 aaKnown RBP15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FAM92AA1XBS5 289 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 J3KR12 359 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 SYN3O14994 580 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 HCAR3P49019 387 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 RORCP51449 518 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 DIO3P55073 304 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 C9orf64Q5T6V5 341 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 LCN8Q6JVE9 175 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 GDPD3Q7L5L3 318 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 YIPF7Q8N8F6 280 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 DBF4BQ8NFT6 615 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 TEX47Q8TBZ9 253 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FAM110BQ8TC76 370 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 CXorf40BQ96DE9 158 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 FANCFQ9NPI8 374 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 PRDM8Q9NQV8 689 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 MBD2Q9UBB5 411 aa15.64■□□□□ 0.09
NPHP3-201ENST00000337331 APOC3P02656 99 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PRKCGP05129 697 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 FCER2P06734 321 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PRPS2P11908 318 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 FOSL1P15407 271 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 CA5AP35218 305 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PPM1AP35813 382 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 GPR68Q15743 365 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 TSTQ16762 297 aaKnown RBP15.63■□□□□ 0.09
NPHP3-201ENST00000337331 MSANTD2Q6P1R3 559 aa15.63■□□□□ 0.09
NPHP3-201ENST00000337331 PIM3Q86V86 326 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms