RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 UBE2FQ969M7 185 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 PTERQ96BW5 349 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 DNAJC11Q9NVH1 559 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 VAPAQ9P0L0 249 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 STYXL1Q9Y6J8 313 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 J3KR12 359 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 CLDN9O95484 217 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 DNASE1P24855 282 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 ARSDP51689 593 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 CREMQ03060 361 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SELPLGQ14242 412 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 LRRC26Q2I0M4 334 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 ISCA2Q86U28 154 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 HJURPQ8NCD3 748 aaPredicted RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 KLHL6Q8WZ60 621 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 POLR2J3Q9H1A7 115 aaKnown RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 CPSF4LA6NMK7 179 aaKnown RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 L7N2F9 121 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SSTR2P30874 369 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 GDI2P50395 445 aaKnown RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 RAB8AP61006 207 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SEMG2Q02383 582 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 OR4D1Q15615 310 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 NFE2Q16621 373 aaPredicted RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 FUNDC1Q8IVP5 155 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 TEX47Q8TBZ9 253 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 FAM129BQ96TA1 746 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 FEVQ99581 238 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 GPR20Q99678 358 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 HOXD1Q9GZZ0 328 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SEMA3GQ9NS98 782 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 DHRS7Q9Y394 339 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 A0A1W2PQL4 384 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FZD9O00144 591 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 PFKLP17858 780 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 GGT1P19440 569 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SLC6A4P31645 630 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 BRCC3P46736 316 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 CENPAP49450 140 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TARDBPQ13148 414 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FLYWCH1Q4VC44 716 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 DCST1Q5T197 706 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 GALNT7Q86SF2 657 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 VWA5B2Q8N398 1253 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ZNF366Q8N895 744 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 AQP11Q8NBQ7 271 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SCAMP5Q8TAC9 235 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 NETO1Q8TDF5 533 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ASB15Q8WXK1 588 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FZD8Q9H461 694 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 RNF167Q9H6Y7 350 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 NTN4Q9HB63 628 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FXYD6-FXYD2A0A087WZ82 144 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ATP6V1G2-DDX39BF2Z307 99 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SMAD9O15198 467 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FFAR2O15552 330 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 MSL3P1P0C860 447 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 NR2F1P10589 423 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 EIF2DP41214 584 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 KCNC1P48547 511 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ABHD18Q0P651 414 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ABRQ12979 859 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 STK11Q15831 433 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 CXXC5Q7LFL8 322 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TCEANCQ8N8B7 351 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 OR5AK3PQ8NH89 298 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 FXYD6Q9H0Q3 95 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 ELAC1Q9H777 363 aaKnown RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 TBC1D24Q9ULP9 559 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 DYRK1BQ9Y463 629 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 H7C2Y5 167 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 OR4Q2P0C623 313 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 PSEN2P49810 448 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 AIF1P55008 147 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 NKX3-2P78367 333 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 POU6F2P78424 691 aaPredicted RBP12.88□□□□□ -0.35
COL2A1-201ENST00000337299 C2orf80Q0P641 193 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 SIRPB2Q5JXA9 342 aa12.88□□□□□ -0.35
COL2A1-201ENST00000337299 UFD1Q92890 307 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms