RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 A0A1W2PRB8 838 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 TRBC2A0A5B9 178 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF670-ZNF695F2Z2N8 137 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SFTPBP07988 381 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 RGS6P49758 472 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NCBP2P52298 156 aaKnown RBP eCLIP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 GPX6P59796 221 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 DSTNP60981 165 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FOXM1Q08050 763 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FGL2Q14314 439 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ATAT1Q5SQI0 421 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF367Q7RTV3 350 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF572Q7Z3I7 529 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 Q8N402 240 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 LPPQ93052 612 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM74Q96NL1 305 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 COL20A1Q9P218 1284 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 EVLQ9UI08 416 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NEXMIFQ5QGS0 1516 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 LRRC72A6NJI9 287 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 TLR5O60602 858 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FPR1P21462 350 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 IKBKEQ14164 716 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 C6orf89Q6UWU4 347 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 PLEKHG7Q6ZR37 379 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NUP54Q7Z3B4 507 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF565Q8N9K5 539 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 OR7G2Q8NG99 324 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NFKBIDQ8NI38 313 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZCCHC10Q8TBK6 192 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 LMLNQ96KR4 655 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ARHGEF4Q9NR80 690 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ERVK-18Q9QC07 812 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FUOMA2VDF0 154 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 GRXCR2A6NFK2 248 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ECI2O75521 394 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 PET100P0DJ07 73 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 CYP1B1Q16678 543 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 FLRT1Q9NZU1 646 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NDRG2Q9UN36 371 aaKnown RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 TLL1O43897 1013 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA31D3P0C874 917 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 PTPRAP18433 802 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MECP2P51608 486 aaKnown RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 PNLIPRP1P54315 467 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 OR4F3Q6IEY1 312 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SPATA31D4Q6ZUB0 917 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 HFE2Q6ZVN8 426 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MUS81Q96NY9 551 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SLC5A7Q9GZV3 580 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 MTG2Q9H4K7 406 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZBTB26Q9HCK0 441 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 VNN3Q9NY84 501 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 STXBP5LQ9Y2K9 1186 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 CXorf49A8MYA2 514 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ENPP3O14638 875 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 PCDH7O60245 1069 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF35P13682 527 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 UBA1P22314 1058 aaKnown RBP9.56□□□□□ -0.88
COL4A6-201ENST00000334504 HTR1BP28222 390 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 CDH11P55287 796 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 UFM1P61960 85 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SLC36A4Q6YBV0 504 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SHKBP1Q8TBC3 707 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 IDI2Q9BXS1 227 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 OR51I1Q9H343 314 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 CENPMQ9NSP4 180 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 SRRDQ9UH36 339 aa9.56□□□□□ -0.88
COL4A6-201ENST00000334504 NRCAMQ92823 1304 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TCRBV7S3A2A0A539 114 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 FAM170BA6NMN3 283 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 WNT7AO00755 349 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CREG1O75629 220 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 UBXN7O94888 489 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 GTF2F2P13984 249 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 HSD3B1P14060 373 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 IL12BP29460 328 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ADCYAP1R1P41586 468 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ERVK-25P63136 954 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ITPK1Q13572 414 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CERS6Q6ZMG9 384 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 BEND4Q6ZU67 534 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SLC15A4Q8N697 577 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MFSD2AQ8NA29 543 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 RPLP0P6Q8NHW5 317 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TESCQ96BS2 214 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF486Q96H40 463 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 MTERF1Q99551 399 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TFB2MQ9H5Q4 396 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 SNX10Q9Y5X0 201 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 RIMS1Q86UR5 1692 aaKnown RBP9.55□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM63AO94886 807 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 CHRNA1P02708 482 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 UGCGQ16739 394 aa9.55□□□□□ -0.88
COL4A6-201ENST00000334504 DPY19L1Q2PZI1 675 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms