RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 RFPL1O75677 317 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 TMEM63AO94886 807 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 C1orf105O95561 183 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 PRB1P04280 392 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 MPC1LP0DKB6 136 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CYP2A7P20853 494 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 AGXTP21549 392 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 F8A1P23610 371 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ARSFP54793 590 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 GYS2P54840 703 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 HSPA14Q0VDF9 509 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 GPS2Q13227 327 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 GRB7Q14451 532 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 KCNAB1Q14722 419 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 GPR19Q15760 415 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 NKG7Q16617 165 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CYP2A13Q16696 494 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 LONRF1Q17RB8 773 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 TTLL9Q3SXZ7 439 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ANKRD20A4Q4UJ75 823 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 C4orf46Q504U0 113 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ZC3H12BQ5HYM0 836 aaKnown RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 TCTE1Q5JU00 501 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CTSL3PQ5NE16 218 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 RNASEH2BQ5TBB1 312 aaKnown RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 PAPD7Q5XG87 772 aaKnown RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 NEPROQ6NW34 567 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 FAM198BQ6UWH4 519 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ATG14Q6ZNE5 492 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CDHR3Q6ZTQ4 885 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 OTOAQ7RTW8 1153 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 PRUNE1Q86TP1 453 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 SLC35F6Q8N357 371 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 DNAJC22Q8N4W6 341 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 TAB3Q8N5C8 712 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 LMNTD1Q8N9Z9 388 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 OR1L3Q8NH93 324 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 C9orf43Q8TAL5 461 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 ADAMTS17Q8TE56 1095 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 JPH3Q8WXH2 748 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 PMM1Q92871 262 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 FKBP10Q96AY3 582 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 SIGLEC10Q96LC7 697 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 SERPINB12Q96P63 405 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 KRTAP4-2Q9BYR5 136 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 SEMA4CQ9C0C4 833 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ACTL8Q9H568 366 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 ACTR5Q9H9F9 607 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 FAM114A2Q9NRY5 505 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 CORO1CQ9ULV4 474 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 PLCL2Q9UPR0 1127 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 FARSAQ9Y285 508 aaKnown RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 PADI2Q9Y2J8 665 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 HEMK1Q9Y5R4 338 aaPredicted RBP6.09□□□□□ -1.43
SMG1-201ENST00000330588 FAM169AQ9Y6X4 670 aa6.09□□□□□ -1.43
SMG1-201ENST00000330588 TCRBV7S3A2A0A539 114 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 FITM1A5D6W6 292 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 C9J4A7 227 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 MKRN2OSH3BPM6 223 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 MYO1CO00159 1063 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 DNALI1O14645 258 aaPredicted RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 PCDH17O14917 1159 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 NKX2-8O15522 239 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 ZSCAN9O15535 394 aaPredicted RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 SRPX2O60687 465 aaPredicted RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 CEACAM4O75871 244 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 PGRP06401 933 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 CAPN1P07384 714 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 PIM1P11309 404 aaPredicted RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 PKMP14618 531 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 PGAM1P18669 254 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 PEBP1P30086 187 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 SKIV2L2P42285 1042 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 RRADP55042 308 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 ETF1P62495 437 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 CRADDP78560 199 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 ABRQ12979 859 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 PRKG2Q13237 762 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 DHX34Q14147 1143 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 MORF4L2Q15014 288 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 FBLN7Q53RD9 439 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 TMEM201Q5SNT2 666 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 ANKRD22Q5VYY1 191 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 UGT3A1Q6NUS8 523 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 KIAA0408Q6ZU52 694 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 CENPUQ71F23 418 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 MED25Q71SY5 747 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 VRK3Q8IV63 474 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 CNTN4Q8IWV2 1026 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 SYTL1Q8IYJ3 562 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 ZBTB2Q8N680 514 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 LINC01555Q8NAE3 123 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 LKAAEAR1Q8TD35 194 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 COG1Q8WTW3 980 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 NAT14Q8WUY8 206 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 N4BP2L2Q92802 583 aaPredicted RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 PAIP2Q9BPZ3 127 aaKnown RBP6.08□□□□□ -1.44
SMG1-201ENST00000330588 SLC26A1Q9H2B4 701 aa6.08□□□□□ -1.44
SMG1-201ENST00000330588 WDR54Q9H977 334 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms