RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 TRHDEQ9UKU6 1024 aa13.98□□□□□ -0.17
CTHRC1-201ENST00000330295 MPDZO75970 2070 aa13.98□□□□□ -0.17
CTHRC1-201ENST00000330295 PTPN7P35236 360 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 ZFP36L2P47974 494 aaKnown RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 MARCKSL1P49006 195 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 ITGA9Q13797 1035 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 BOP1Q14137 746 aaKnown RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 FASTKQ14296 549 aaKnown RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 DAZAP2Q15038 168 aaPredicted RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 SLC14A2Q15849 920 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 FAM214AQ32MH5 1076 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 TCTE1Q5JU00 501 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 ZDHHC20Q5W0Z9 365 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 SLC25A25Q6KCM7 469 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 OR10Q1Q8NGQ4 319 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 LRRN4Q8WUT4 740 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 ALS2CR12Q96Q35 445 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 OLFM1Q99784 485 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 TUBB6Q9BUF5 446 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 MENTQ9BUN1 341 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 GRPEL1Q9HAV7 217 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 SMOXQ9NWM0 555 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 KLHL8Q9P2G9 620 aaPredicted RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 SAE1Q9UBE0 346 aaPredicted RBP13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 GUCA1BQ9UMX6 200 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 KLHL20Q9Y2M5 609 aa13.97□□□□□ -0.17
CTHRC1-201ENST00000330295 GLYATL1P3A0A0U1RQE8 302 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 FITM1A5D6W6 292 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 SGTAO43765 313 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 NEURL1O76050 574 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 SUN1O94901 812 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 PECAM1P16284 738 aaPredicted RBP13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 MAGP20916 626 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 CD151P48509 253 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 ZBTB17Q13105 803 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 MAPKAPK3Q16644 382 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 SLC25A35Q3KQZ1 300 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 EMC4Q5J8M3 183 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 H3F3CQ6NXT2 135 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 PRMT9Q6P2P2 845 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 CAPN12Q6ZSI9 719 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 PID1Q7Z2X4 250 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 CDKL3Q8IVW4 592 aaPredicted RBP13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 LRRC8AQ8IWT6 810 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 HORMAD2Q8N7B1 307 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 OR5M3Q8NGP4 307 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 LRRC45Q96CN5 670 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 TEKT5Q96M29 485 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 GLOD4Q9HC38 313 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 ENAMQ9NRM1 1142 aa13.96□□□□□ -0.17
CTHRC1-201ENST00000330295 TRIM64A6NGJ6 449 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 TRIM64BA6NI03 449 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 ISM1B1AKI9 464 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 GAPDHSO14556 408 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 TFECO14948 347 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 CDC40O60508 579 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 MED26O95402 600 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 FTCDO95954 541 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 HEXBP07686 556 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 PTPN3P26045 913 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 OC90Q02509 493 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 PCSK7Q16549 785 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 MEP1AQ16819 746 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 ITPRIPL1Q6GPH6 555 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 DARS2Q6PI48 645 aaKnown RBP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 LIX1LQ8IVB5 337 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 LRRC75A-AS1Q8N1F1 130 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 CNTD1Q8N815 330 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 TFGQ92734 400 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF285Q96NJ3 590 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 PPP1R2P1Q96PQ5 205 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 CEP41Q9BYV8 373 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 OR6C2Q9NZP2 312 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 FAM153AQ9UHL3 310 aa13.95□□□□□ -0.18
CTHRC1-201ENST00000330295 PRMT3O60678 531 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 SIX3O95343 332 aaPredicted RBP13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 BMP7P18075 431 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 TFEBP19484 476 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 FBLP22087 321 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 UQCRC1P31930 480 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 EIF3EP60228 445 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 NOMO1Q15155 1222 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 ZC3H12BQ5HYM0 836 aaKnown RBP13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 PRSS57Q6UWY2 283 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 UNC5DQ6UXZ4 953 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 CRLF3Q8IUI8 442 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 ACTL9Q8TC94 416 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 SELENOSQ9BQE4 189 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 C14orf105Q9NVL8 296 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 ZNF407Q9C0G0 2248 aa13.94□□□□□ -0.18
CTHRC1-201ENST00000330295 A0A0G2JNJ9 132 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 HYKKA2RU49 373 aa13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 PHF1O43189 567 aaPredicted RBP13.93□□□□□ -0.18
CTHRC1-201ENST00000330295 NME2P1O60361 137 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms