RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 ERVPABLB-1P60509 514 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 ABCE1P61221 599 aaKnown RBP4.98□□□□□ -1.61
LRIT3-201ENST00000327908 TIAL1Q01085 375 aaKnown RBP eCLIP4.98□□□□□ -1.61
LRIT3-201ENST00000327908 FAM53BQ14153 422 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 PFKFB4Q16877 469 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 IMPG1Q17R60 797 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 PTCHD3Q3KNS1 767 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 DCAF12Q5T6F0 453 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 C6orf163Q5TEZ5 329 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 MBOAT1Q6ZNC8 495 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 IKBIPQ70UQ0 350 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 SPATA19Q7Z5L4 167 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 ESX1Q8N693 406 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 TEX9Q8N6V9 391 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 OR4E2Q8NGC2 313 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 NCSTNQ92542 709 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 MED8Q96G25 268 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 ZNF285Q96NJ3 590 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 SLC7A5P2Q9GIP4 190 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 TCEAL2Q9H3H9 227 aaPredicted RBP4.98□□□□□ -1.61
LRIT3-201ENST00000327908 RABEP2Q9H5N1 569 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 CAB39LQ9H9S4 337 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 THSD1Q9NS62 852 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 TXLNGQ9NUQ3 528 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 GIMAP4Q9NUV9 329 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.98□□□□□ -1.61
LRIT3-201ENST00000327908 UCKL1Q9NWZ5 548 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 DLL3Q9NYJ7 618 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 GPN3Q9UHW5 284 aaPredicted RBP4.98□□□□□ -1.61
LRIT3-201ENST00000327908 ZFP69BQ9UJL9 534 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 PCTPQ9UKL6 214 aa4.98□□□□□ -1.61
LRIT3-201ENST00000327908 IQCF5A8MTL0 148 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PATE3B3GLJ2 98 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 E7EQ34 232 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 H0YIG0 161 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 DYRK3O43781 588 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 RASSF9O75901 435 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 SUPT7LO94864 414 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 KCNK5O95279 499 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 SLC16A8O95907 504 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ALBP02768 609 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 KLK3P07288 261 aaPredicted RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 RAB40ALP0C0E4 278 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 FTH1P19P0C7X4 201 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PRPS2P11908 318 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 JAK1P23458 1154 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ALDH4A1P30038 563 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PRDX3P30048 256 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 SCTRP47872 440 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 RAP1GDS1P52306 607 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 CCL7P80098 99 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 MAPRE2Q15555 327 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 OR4D1Q15615 310 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 SMAD1Q15797 465 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 DPY19L1Q2PZI1 675 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 XKR6Q5GH73 641 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 GUSBP11Q6P575 273 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TRIM40Q6P9F5 258 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TMIGD1Q6UXZ0 262 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ASCL5Q7RTU5 278 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TMPRSS7Q7RTY8 843 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 GOLGA7Q7Z5G4 137 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ARHGAP22Q7Z5H3 698 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 R3HCC1LQ7Z5L2 792 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 GATAD2AQ86YP4 633 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 C4orf33Q8N1A6 199 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 DNAJB8Q8NHS0 232 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 KIAA1143Q96AT1 154 aaPredicted RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 FAM111AQ96PZ2 611 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TRAPPC9Q96Q05 1148 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PRPF18Q99633 342 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 NDC1Q9BTX1 674 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 MANSC1Q9H8J5 431 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ASIC5Q9NY37 505 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM216Q9P0N5 145 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 C19orf25Q9UFG5 118 aaPredicted RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 WDR37Q9Y2I8 494 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PRKAB1Q9Y478 270 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ARHGAP10A1A4S6 786 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 HMX2A2RU54 273 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 FITM1A5D6W6 292 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 UBXN8O00124 270 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 AZIN1O14977 448 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 FUCA1P04066 466 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 VIMP08670 466 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 POLR2CP19387 275 aaPredicted RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 RPL10P27635 214 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 CLNS1AP54105 237 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 CHIT1Q13231 466 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ZNF542PQ5EBM4 170 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TAX1BP1Q86VP1 789 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 HPS6Q86YV9 775 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 SLITRK4Q8IW52 837 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 KBTBD2Q8IY47 623 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 LRRC56Q8IYG6 542 aaPredicted RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 CKAP2Q8WWK9 683 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms