RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 FAM124AQ86V42 546 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 ESX1Q8N693 406 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 MYLPFQ96A32 169 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 MGLLQ99685 303 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TAPBPLQ9BX59 468 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 RNF121Q9H920 327 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 MAT2BQ9NZL9 334 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TMPRSS11EQ9UL52 423 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
CCDC60-201ENST00000327554 ZNF451Q9Y4E5 1061 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 PTPRDP23468 1912 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 MYO16Q9Y6X6 1858 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 TTC3P53804 2025 aa12.4□□□□□ -0.42
CCDC60-201ENST00000327554 EFCAB10A6NFE3 127 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 NT5C1B-RDH14C9J2C7 533 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 OR1I1O60431 355 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ESR1P03372 595 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CYP2A6P11509 494 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 BCKDHAP12694 445 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 HLA-DMAP28067 261 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 KDELR2P33947 212 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 MLLT6P55198 1093 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 HSPA14Q0VDF9 509 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 PTCHD3Q3KNS1 767 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ZZZ3Q8IYH5 903 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 SLC39A13Q96H72 371 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 FRMD6Q96NE9 622 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 EPYCQ99645 322 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ASPNQ9BXN1 380 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 UCK2Q9BZX2 261 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM39AQ9NV64 488 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 KLHL21Q9UJP4 597 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 RPS6KA6Q9UK32 745 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 TNPO3Q9Y5L0 923 aaKnown RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 SLC28A1O00337 649 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ARHGEF9O43307 516 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CCNYL3P0C7X3 344 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 DARSP14868 501 aaKnown RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 TEKQ02763 1124 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 VMACQ2NL98 169 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 GLYR1Q49A26 553 aaPredicted RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 C5orf22Q49AR2 442 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 SLC35F1Q5T1Q4 408 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CCNJQ5T5M9 372 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 TIGD3Q6B0B8 471 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 AFTPHQ6ULP2 937 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 PAMR1Q6UXH9 720 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CBLL1Q75N03 491 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 EIF3MQ7L2H7 374 aaKnown RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 PIANPQ8IYJ0 282 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF683Q8IZ20 524 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 RGL4Q8IZJ4 473 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CARNMT1Q8N4J0 409 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CHCHD4Q8N4Q1 142 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 PPTC7Q8NI37 304 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 C7orf34Q96L11 122 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 NIPAL2Q9H841 368 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM184CQ9NVA4 438 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 GPRC5BQ9NZH0 403 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 PCDHGA2Q9Y5H1 932 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 CFAP20Q9Y6A4 193 aaKnown RBP12.39□□□□□ -0.43
CCDC60-201ENST00000327554 GREB1Q4ZG55 1949 aa12.39□□□□□ -0.43
CCDC60-201ENST00000327554 SEC14L5O43304 696 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 DPM1O60762 260 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 C1QBP02746 253 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CSF2P04141 144 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CSF3P09919 207 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 IFI30P13284 250 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF30P17039 623 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CD9P21926 228 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 CHMP24386 653 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 S100A3P33764 101 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 MED22Q15528 200 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 ALFQ53S48 1182 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 SBSNQ6UWP8 590 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 ZNF605Q86T29 641 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 EFHBQ8N7U6 833 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 B3GNT7Q8NFL0 401 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
CCDC60-201ENST00000327554 C9orf43Q8TAL5 461 aaPredicted RBP12.38□□□□□ -0.43
CCDC60-201ENST00000327554 MARVELD3Q96A59 401 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms