RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TUBB3Q13509 450 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 NR0B2Q15466 257 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 HIST2H2ACQ16777 129 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 C10orf62Q5T681 223 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 HIST2H2AA3Q6FI13 130 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ARMC6Q6NXE6 501 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SPESP1Q6UW49 350 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 LAS2Q8IYD9 372 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 KRT78Q8N1N4 520 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 OR6C4Q8NGE1 309 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 WDR20Q8TBZ3 569 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 CCT6BQ92526 530 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 UBE2E3Q969T4 207 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 PPP1R36Q96LQ0 422 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 IRF2BPLQ9H1B7 796 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 SPNS1Q9H2V7 528 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 EPB41L1Q9H4G0 881 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 NT5DC2Q9H857 520 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 TCF7L2Q9NQB0 619 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 TMEM184CQ9NVA4 438 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 DNAAF2Q9NVR5 837 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 ANKMY1Q9P2S6 941 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 POMT2Q9UKY4 750 aa9.86□□□□□ -0.83
VIPAS39-201ENST00000327028 HEATR5BQ9P2D3 2071 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 RALGAPA1Q6GYQ0 2036 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 LY6G6EA0A0G2JKS1 128 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 LNP1A1A4G5 178 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 VPS4BO75351 444 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF806P0C7X5 589 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 LINC00032P0C843 101 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 TYRP1P17643 537 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 CSNK1G2P78368 415 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 NAA25Q14CX7 972 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 ABRAXAS2Q15018 415 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 KIAA1614Q5VZ46 1190 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF425Q6IV72 752 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 TRIM73Q86UV7 250 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 EID2Q8N6I1 236 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 APOLD1Q96LR9 279 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 C3orf30Q96M34 536 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 RILPQ96NA2 401 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 OR52B2Q96RD2 323 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 WDR55Q9H6Y2 383 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 RIC8BQ9NVN3 520 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF490Q9ULM2 529 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 TSC22D4Q9Y3Q8 395 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 KLK4Q9Y5K2 254 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 U3KQA8 63 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 GOLGA4Q13439 2230 aaKnown RBP9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 GOLGA8QA0A0J9YX86 632 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 A0A0J9YY10 115 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 GOLGA8OA6NCC3 632 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 GOLGA8NF8WBI6 632 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 H7BY64 318 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC28A1O00337 649 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 PDYNP01213 254 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 PNLIPP16233 465 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 AMD1P17707 334 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 INAVAQ3KP66 663 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 SCIMPQ6UWF3 145 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 TRIM46Q7Z4K8 759 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 OR7G3Q8NG95 312 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 SELENOMQ8WWX9 145 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 PRAP1Q96NZ9 151 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 DPH7Q9BTV6 452 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 FARSBQ9NSD9 589 aaKnown RBP9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 SNX7Q9UNH6 387 aa9.85□□□□□ -0.83
VIPAS39-201ENST00000327028 TRBC2A0A5B9 178 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 TNFSF14O43557 240 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 SERPINB1P30740 379 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 GRIA3P42263 894 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 MEF2AQ02078 507 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 CSTF3Q12996 717 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 SUZ12Q15022 739 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 LSM12Q3MHD2 195 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 SGO1Q5FBB7 561 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 TMIGD1Q6UXZ0 262 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ADCK2Q7Z695 626 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PAQR7Q86WK9 346 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 FAM20CQ8IXL6 584 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2T11Q8NH01 316 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ATOH1Q92858 354 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 RAB33BQ9H082 229 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PRDM4Q9UKN5 801 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 CCL27Q9Y4X3 112 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2A25A4D2G3 310 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 RGS14O43566 566 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 DCTN3O75935 186 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PRR35P0CG20 571 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PCNAP12004 261 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 MYF5P13349 255 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 HSD3B1P14060 373 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 HSD3B2P26439 372 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 NBL1P41271 181 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PHEXP78562 749 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 GPLD1P80108 840 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 PROX2Q3B8N5 592 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 NXNQ6DKJ4 435 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 LARP4Q71RC2 724 aaKnown RBP eCLIP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ALYREFQ86V81 257 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms