RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 METTL27Q8N6F8 245 aaPredicted RBP16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 ZNF480Q8WV37 535 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 ZNF669Q96BR6 464 aaPredicted RBP16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 FAM136AQ96C01 138 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 C5orf34Q96MH7 638 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 SERPINB12Q96P63 405 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 MKKSQ9NPJ1 570 aaPredicted RBP16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 TRPC4Q9UBN4 977 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 ERRFI1Q9UJM3 462 aaPredicted RBP16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 PPP2R2CQ9Y2T4 447 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 MED16Q9Y2X0 877 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 NEU2Q9Y3R4 380 aa16.85■□□□□ 0.29
PTPMT1-201ENST00000326656 NSG1A0A0A6YYJ2 146 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 IDSB3KWA1 339 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 NRP2O60462 931 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 LDLRP01130 860 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 SERPINA7P05543 415 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 ICAM2P13598 275 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 MAGEA3P43357 314 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 VPS41P49754 854 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 VWA2Q5GFL6 755 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 ANKRD22Q5VYY1 191 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 CYHR1Q6ZMK1 362 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 MAMDC2Q7Z304 686 aaPredicted RBP16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 KCNMB4Q86W47 210 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 GABPB2Q8TAK5 448 aaPredicted RBP16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 FAR1Q8WVX9 515 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 TAC3Q9UHF0 121 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 RUVBL1Q9Y265 456 aaKnown RBP16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 NTNG1Q9Y2I2 539 aa16.84■□□□□ 0.29
PTPMT1-201ENST00000326656 KCNE1BA0A087WTH5 132 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 SMAPO00193 183 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 ALOX12BO75342 701 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CYC1P08574 325 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 ANXA5P08758 320 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 EDN3P14138 238 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 COILP38432 576 aaPredicted RBP16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CCZ1BP86790 482 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CCZ1P86791 482 aaPredicted RBP16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CDC16Q13042 620 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CTBP1Q13363 440 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 NDUFA9Q16795 377 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 ZNF549Q6P9A3 640 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CCDC137Q6PK04 289 aaKnown RBP16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 LAPTM4BQ86VI4 370 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 ARHGEF39Q8N4T4 335 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 DTWD1Q8N5C7 304 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 SIGLEC10Q96LC7 697 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 FAM129AQ9BZQ8 928 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 DRC3Q9H069 523 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 PCBD2Q9H0N5 130 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 ZNF160Q9HCG1 818 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 CELSR2Q9HCU4 2923 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 TMEM184CQ9NVA4 438 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 TSR3Q9UJK0 312 aaKnown RBP16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 FBXO5Q9UKT4 447 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 NBPF19A0A087WUL8 3843 aa16.83■□□□□ 0.28
PTPMT1-201ENST00000326656 LOC102723996A0A087X1L8 192 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 H0YIG0 161 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 KIF5CO60282 957 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 KLHL18O94889 574 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 BMP10O95393 424 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 RNF224P0DH78 156 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 TSTA3Q13630 321 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 UGT3A1Q6NUS8 523 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 DENND6AQ8IWF6 608 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 LRRC56Q8IYG6 542 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 PRSS58Q8IYP2 241 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 AMER3Q8N944 861 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 GIMAP7Q8NHV1 300 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 MCOLN3Q8TDD5 553 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 GRHL3Q8TE85 626 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 GRK7Q8WTQ7 553 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 HAS2Q92819 552 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 THAP11Q96EK4 314 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 MMABQ96EY8 250 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 SLC30A3Q99726 388 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 TRIM56Q9BRZ2 755 aaKnown RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 FAM167BQ9BTA0 163 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 FBXO6Q9NRD1 293 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 RIC8BQ9NVN3 520 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 STOX2Q9P2F5 926 aaPredicted RBP16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 CSAG2Q9Y5P2 127 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 CRYBG3Q68DQ2 2970 aa16.82■□□□□ 0.28
PTPMT1-201ENST00000326656 DYTNA2CJ06 578 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 PGRMC1O00264 195 aaKnown RBP16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 FOXS1O43638 330 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 SYF2O95926 243 aaKnown RBP16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 HEXBP07686 556 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 PRR35P0CG20 571 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 COX6A1P12074 109 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 SOX11P35716 441 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 SLC1A2P43004 574 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 AVPR1BP47901 424 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 TERF1P54274 439 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 PER3P56645 1201 aa16.81■□□□□ 0.28
PTPMT1-201ENST00000326656 PTK6Q13882 451 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms