RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 BLOC1S3Q6QNY0 202 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 AQP12AQ8IXF9 295 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 VMP1Q96GC9 406 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 APIPQ96GX9 242 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 C17orf62Q9BQA9 187 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 HERC2P3Q9BVR0 1158 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 PREBQ9HCU5 417 aa11.48□□□□□ -0.57
DDR1-223ENST00000324771 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 CREG1O75629 220 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 NT5EP21589 574 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 KELP23276 732 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 FEN1P39748 380 aaKnown RBP11.47□□□□□ -0.57
DDR1-223ENST00000324771 CTSL3PQ5NE16 218 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 ERN2Q76MJ5 926 aaKnown RBP11.47□□□□□ -0.57
DDR1-223ENST00000324771 PEX13Q92968 403 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 COL21A1Q96P44 957 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SLC29A1Q99808 456 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SRMSQ9H3Y6 488 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 PALMDQ9NP74 551 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RWDD3Q9Y3V2 267 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 LRRC72A6NJI9 287 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SLC22A2O15244 555 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 GUCY1B2O75343 617 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 MMP2P08253 660 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 HNMTP50135 292 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 CLCN4P51793 760 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 EEFSECP57772 596 aaKnown RBP11.47□□□□□ -0.57
DDR1-223ENST00000324771 MINDY4Q4G0A6 757 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 PIGGQ5H8A4 983 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RNF44Q7L0R7 432 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 CLEC14AQ86T13 490 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 TNFRSF12AQ9NP84 129 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SEMA3GQ9NS98 782 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 MAP10Q9P2G4 905 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 MAGED1Q9Y5V3 778 aaPredicted RBP11.47□□□□□ -0.57
DDR1-223ENST00000324771 CACNA1IQ9P0X4 2223 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SPTA1P02549 2419 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 ERN1O75460 977 aaKnown RBP11.47□□□□□ -0.57
DDR1-223ENST00000324771 H6PDO95479 791 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RFC2P35250 354 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RGS1Q08116 209 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 EPS8Q12929 822 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 RFX4Q33E94 735 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 CATSPEREQ5SY80 951 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 MANEALQ5VSG8 457 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 SCML4Q8N228 414 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 FAM46DQ8NEK8 389 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 PIH1D2Q8WWB5 315 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 MAL2Q969L2 176 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 UBXN10Q96LJ8 280 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 IL4I1Q96RQ9 567 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 C1QTNF1Q9BXJ1 281 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 CMTM6Q9NX76 183 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 PCDHGA7Q9Y5G6 932 aa11.47□□□□□ -0.57
DDR1-223ENST00000324771 E7EQ34 232 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 IMPDH2P12268 514 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 TNFRSF1BP20333 461 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 CDH3P22223 829 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 GALK1P51570 392 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 HEPACAMQ14CZ8 416 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 SYT16Q17RD7 645 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 CD300LGQ6UXG3 332 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 PTCHD4Q6ZW05 846 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 KCTD8Q6ZWB6 473 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 RETREG3Q86VR2 466 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 GPR65Q8IYL9 337 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 HS3ST5Q8IZT8 346 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 FGF13Q92913 245 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 F2RL3Q96RI0 385 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 CNOT1A5YKK6 2376 aaKnown RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 QSER1Q2KHR3 1735 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 MROH6A6NGR9 719 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 NDUFS4O43181 175 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 SERPINB7O75635 380 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 RB1P06400 928 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 CD1EP15812 388 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 TCEA1P23193 301 aaKnown RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 RPL34P49207 117 aaKnown RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 ACADVLP49748 655 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 TBPL1P62380 186 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 KLHL12Q53G59 568 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 ZNF783Q6ZMS7 281 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 BHLHA9Q7RTU4 235 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 ERMP1Q7Z2K6 904 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 LRRC70Q7Z2Q7 622 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 ZNF761Q86XN6 746 aaPredicted RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 TTC29Q8NA56 475 aaPredicted RBP11.46□□□□□ -0.57
DDR1-223ENST00000324771 ZFP28Q8NHY6 868 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 SMARCD2Q92925 531 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 MARCH7Q9H992 704 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 POPDC3Q9HBV1 291 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 C11orf16Q9NQ32 467 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 AP3M1Q9Y2T2 418 aa11.46□□□□□ -0.57
DDR1-223ENST00000324771 OAS3Q9Y6K5 1087 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms