RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 SPANXN2Q5MJ10 180 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 BLOC1S3Q6QNY0 202 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 TEX47Q8TBZ9 253 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 DNASE1L2Q92874 299 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 RNFT2Q96EX2 444 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 TMED5Q9Y3A6 229 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 KMOO15229 486 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 CAPN3P20807 821 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 ADARP55265 1226 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 DCST1Q5T197 706 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 ZNF730Q6ZMV8 503 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 HTR3DQ70Z44 454 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 FAM46DQ8NEK8 389 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 SHKBP1Q8TBC3 707 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 SLC2A11Q9BYW1 496 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 OAS3Q9Y6K5 1087 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 CEBPBP17676 345 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 RPL4P36578 427 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 PRR5P85299 388 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 ROR2Q01974 943 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 SCARB2Q14108 478 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 GRIN2CQ14957 1233 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 PERM1Q5SV97 790 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 SLC35G5Q96KT7 338 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 Q96MT0 163 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 BTBD1Q9H0C5 482 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 FARSBQ9NSD9 589 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 TRPS1Q9UHF7 1281 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 CCL26Q9Y258 94 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 EFCAB10A6NFE3 127 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 FADS2P1A8MWK0 482 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 GRXCR1A8MXD5 290 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 LATO43561 262 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 LAMP2P13473 410 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 ARSAP15289 507 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 HOXB6P17509 224 aaKnown RBP16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 MS4A2Q01362 244 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 GPR135Q8IZ08 494 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 SLC45A3Q96JT2 553 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 C3orf30Q96M34 536 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 NODALQ96S42 347 aa16.53■□□□□ 0.24
PPP3CA-201ENST00000323055 FAM25AB3EWG3 89 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 FAM25CB3EWG5 89 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 FAM25GB3EWG6 89 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 NDUFB5O43674 189 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 AHCYL1O43865 530 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 SLC16A8O95907 504 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 GTF2E2P29084 291 aaKnown RBP16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 ABHD18Q0P651 414 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 TIMM50Q3ZCQ8 353 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 SVOPLQ8N434 492 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 RGMAQ96B86 450 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 SFXN1Q9H9B4 322 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 RIMKLBQ9ULI2 386 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 HCFC2Q9Y5Z7 792 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 SCN1AP35498 2009 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 WASH3PC4AMC7 463 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 GADD45GO95257 159 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 PCSK2P16519 638 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 OR5K1Q8NHB7 308 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 TPK1Q9H3S4 243 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 SOX17Q9H6I2 414 aaPredicted RBP16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.24
PPP3CA-201ENST00000323055 MYOCOSA0A1B0GUC4 107 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 I6L893 689 aaPredicted RBP16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 C6orf47O95873 294 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 RUNX3Q13761 415 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 NPAS3Q8IXF0 933 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 WDR36Q8NI36 951 aaKnown RBP16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 ARMC5Q96C12 935 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 PKP4Q99569 1192 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 HMG20AQ9NP66 347 aa16.52■□□□□ 0.23
PPP3CA-201ENST00000323055 CAPN14A8MX76 684 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 RGS10O43665 173 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 NADKO95544 446 aaPredicted RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 C8orf89P0DMQ9 161 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 BIKQ13323 160 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 NFE2L1Q14494 772 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 RAB30Q15771 203 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 KCTD8Q6ZWB6 473 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 CAMKK1Q8N5S9 505 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 P2RY13Q9BPV8 354 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 TRMUO75648 421 aaKnown RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 ALPPL2P10696 532 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 RPL34P49207 117 aaKnown RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 OR4D2P58180 307 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 TBPL1P62380 186 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 LRRC26Q2I0M4 334 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 LHX8Q68G74 356 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 CHMP1BQ7LBR1 199 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 AMER2Q8N7J2 671 aa16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 JPH3Q8WXH2 748 aaPredicted RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 RBM18Q96H35 190 aaKnown RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 DNAAF2Q9NVR5 837 aaKnown RBP16.51■□□□□ 0.23
PPP3CA-201ENST00000323055 LHX3Q9UBR4 397 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms