RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 IRF9Q00978 393 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 GNMTQ14749 295 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC36A4Q6YBV0 504 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 BMP8AQ7Z5Y6 402 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 NETO2Q8NC67 525 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 FAM110BQ8TC76 370 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 SCGB1C1Q8TD33 95 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 OTUB2Q96DC9 234 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 ADAD1Q96M93 576 aaKnown RBP16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 AOC1P19801 751 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 CTNNB1P35222 781 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC22A17Q8WUG5 538 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 SLC5A7Q9GZV3 580 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 C12orf65Q9H3J6 166 aaKnown RBP16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 FAM83DQ9H4H8 585 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 KCTD9Q7L273 389 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 CDK5RAP2Q96SN8 1893 aa16.46■□□□□ 0.23
SMCHD1-201ENST00000320876 CLIC1O00299 241 aa16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 SCDO00767 359 aa16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 POP4O95707 220 aaKnown RBP16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 PTGIRP43119 386 aa16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 HADHBP55084 474 aaKnown RBP16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM139Q8IV31 216 aa16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 FAM208AQ9UK61 1670 aaKnown RBP16.46■□□□□ 0.22
SMCHD1-201ENST00000320876 ARSHQ5FYA8 562 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 EPYCQ99645 322 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 RNF121Q9H920 327 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 HERV-K104P61576 105 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 HCAR2Q8TDS4 363 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 ASB15Q8WXK1 588 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 SPATA31A5Q5VU36 1347 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 SPATA31A7Q8IWB4 1347 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 DNAJB5O75953 348 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 TMCO2Q7Z6W1 182 aaPredicted RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 NUDT13Q86X67 352 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 PREBQ9HCU5 417 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 SDHAF4Q5VUM1 108 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 RNF19AQ9NV58 838 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 VPS29Q9UBQ0 182 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 LAMP5Q9UJQ1 280 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 SNX10Q9Y5X0 201 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 C2orf92A0A1B0GVN3 265 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 CXCR1P25024 350 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 IL10RBQ08334 325 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 HFE2Q6ZVN8 426 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 ELMOD2Q8IZ81 293 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 OVCA2Q8WZ82 227 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 MAELQ96JY0 434 aaKnown RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF358Q9NW07 568 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 MSRAQ9UJ68 235 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 TEX13DA0A0J9YY54 714 aaPredicted RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 PI15O43692 258 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 DUOXA1Q1HG43 343 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 TMEM145Q8NBT3 493 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 K7EPI3 171 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 RNASEH2AO75792 299 aaKnown RBP16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 FAM124AQ86V42 546 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 EBF4Q9BQW3 602 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 ZNF649Q9BS31 505 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 SRMSQ9H3Y6 488 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 GLS2Q9UI32 602 aa16.45■□□□□ 0.22
SMCHD1-201ENST00000320876 TAF10Q12962 218 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 CYP4V2Q6ZWL3 525 aaPredicted RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 KIF18BQ86Y91 864 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MYNNQ9NPC7 610 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NLGN3Q9NZ94 848 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 GKN3PP0CG01 181 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ENGP17813 658 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 UGT2B10P36537 528 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MAGEA8P43361 318 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MBOAT1Q6ZNC8 495 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 OR4C15Q8NGM1 316 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 SPPL2BQ8TCT7 592 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 CANT1Q8WVQ1 401 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 BTBD1Q9H0C5 482 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 HOXD8P13378 290 aaPredicted RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 GRIA2P42262 883 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TREX2Q9BQ50 279 aaPredicted RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TBL1XR1Q9BZK7 514 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 PCDHB16Q9NRJ7 776 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 ENAMQ9NRM1 1142 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 STBD1O95210 358 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 DNAJB1P25685 340 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 L1CAMP32004 1257 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 NRIP1P48552 1158 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 CYP2S1Q96SQ9 504 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 TM9SF2Q99805 663 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 CAPN14A8MX76 684 aa16.44■□□□□ 0.22
SMCHD1-201ENST00000320876 MSR1P21757 451 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms