RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 NXPE1Q8N323 547 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 TCAIMQ8N3R3 496 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 SYNPOQ8N3V7 929 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 C2orf69Q8N8R5 385 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 CSGALNACT1Q8TDX6 532 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 PANX1Q96RD7 426 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 AGAP14A8MT82 685 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 NUAK1O60285 661 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 PTTG1O95997 202 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 SLC6A12P48065 614 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 UGT8Q16880 541 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 RTP2Q5QGT7 225 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 ATAD3BQ5T9A4 648 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 PNCKQ6P2M8 343 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 TRAF7Q6Q0C0 670 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 SLC46A3Q7Z3Q1 461 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 CBARPQ8N350 705 aaPredicted RBP18.51■□□□□ 0.55
RTN4-201ENST00000317610 CHAC2Q8WUX2 184 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 WBP2Q969T9 261 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 APOLD1Q96LR9 279 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 CCDC59Q9P031 241 aaKnown RBP18.51■□□□□ 0.55
RTN4-201ENST00000317610 AP1M2Q9Y6Q5 423 aa18.51■□□□□ 0.55
RTN4-201ENST00000317610 MAGEB17A8MXT2 336 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 SCAMP3O14828 347 aaKnown RBP18.5■□□□□ 0.55
RTN4-201ENST00000317610 RFPL2O75678 378 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 KCNK2O95069 426 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 GADD45AP24522 165 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 ZNF45Q02386 682 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 PRKCDQ05655 676 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 CCSAPQ6IQ19 270 aaPredicted RBP18.5■□□□□ 0.55
RTN4-201ENST00000317610 AKAP14Q86UN6 197 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 P3H2Q8IVL5 708 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 SLC22A15Q8IZD6 547 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 SPATA9Q9BWV2 254 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 VPS51Q9UID3 782 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 POU2F3Q9UKI9 436 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 ATP11BQ9Y2G3 1177 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 TESMINQ9Y4I5 508 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 H7C4K7 107 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 EIF3FO00303 357 aaPredicted RBP18.5■□□□□ 0.55
RTN4-201ENST00000317610 DSCR3O14972 297 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 SEPT4O43236 478 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 TBX1O43435 398 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 CLDN7O95471 211 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 GGT2P36268 569 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 SPAM1P38567 509 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 LIMK1P53667 647 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 C21orf58P58505 322 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 MBTPS1Q14703 1052 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 TIGD6Q17RP2 521 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 PDE12Q6L8Q7 609 aaKnown RBP18.5■□□□□ 0.55
RTN4-201ENST00000317610 DNAJC22Q8N4W6 341 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 OR8J2Q8NGG1 315 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 HTRA1Q92743 480 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 MYDGFQ969H8 173 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 RAD9AQ99638 391 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 FAM120CQ9NX05 1096 aaKnown RBP18.5■□□□□ 0.55
RTN4-201ENST00000317610 STOML2Q9UJZ1 356 aa18.5■□□□□ 0.55
RTN4-201ENST00000317610 CDK1P06493 297 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 HNF1BP35680 557 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 SLC19A1P41440 591 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 CRYBA2P53672 197 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 KCNJ10P78508 379 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 FUT10Q6P4F1 479 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 FAM124AQ86V42 546 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 AMER2Q8N7J2 671 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 POC5Q8NA72 575 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 DPH2Q9BQC3 489 aaPredicted RBP18.49■□□□□ 0.55
RTN4-201ENST00000317610 CDADC1Q9BWV3 514 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 KLF16Q9BXK1 252 aaPredicted RBP18.49■□□□□ 0.55
RTN4-201ENST00000317610 SLC12A9Q9BXP2 914 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 CHST8Q9H2A9 424 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 KLHL3Q9UH77 587 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.49■□□□□ 0.551e-12■■□□□ 13.7
RTN4-201ENST00000317610 PLXNB3Q9ULL4 1909 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 PRAMEF4O60810 478 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 NBNO60934 754 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 AOAHP28039 575 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 CTGFP29279 349 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 C21orf33P30042 268 aaPredicted RBP18.49■□□□□ 0.55
RTN4-201ENST00000317610 NSG1P42857 185 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 TEKQ02763 1124 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 PRAMEF9Q5VWM5 478 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 FRG2Q64ET8 278 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 ZNF621Q6ZSS3 439 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 ALG14Q96F25 216 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 FRG2BQ96QU4 278 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 CEP44Q9C0F1 390 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 PADI2Q9Y2J8 665 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 PCDHGB3Q9Y5G1 929 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 PCDHGA3Q9Y5H0 932 aa18.49■□□□□ 0.55
RTN4-201ENST00000317610 SNPHO15079 494 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 CKBP12277 381 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 PTPN2P17706 415 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 PCYT1AP49585 367 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 LRIT3Q3SXY7 679 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 FBXO43Q4G163 708 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 TPRG1LQ5T0D9 272 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 MFSD14CQ5VZR4 134 aa18.48■□□□□ 0.55
RTN4-201ENST00000317610 UBE2R2Q712K3 238 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms