RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 C1QTNF6Q9BXI9 259 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 REG4Q9BYZ8 158 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 HEXA-AS1Q9H8Q6 139 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CSNK1G1Q9HCP0 422 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 CMTM6Q9NX76 183 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 USE1Q9NZ43 259 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 NDRG3Q9UGV2 375 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 PTCH2Q9Y6C5 1203 aa6.47□□□□□ -1.37
ZNF540-201ENST00000316433 A0A1B0GV90 55 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 CXCL11O14625 94 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 PDE9AO76083 593 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 PGLSO95336 258 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 STAG3L1P0CL83 205 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ACPPP15309 386 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 FSHRP23945 695 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 GPX4P36969 197 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-201ENST00000316433 TGFBR2P37173 567 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ALDH3A2P51648 485 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 SLC7A2P52569 658 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ARSFP54793 590 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 SPCS3P61009 180 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 QPRTQ15274 297 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 KIAA0319Q5VV43 1072 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ANKRD54Q6NXT1 300 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 TRMT10BQ6PF06 316 aaKnown RBP6.46□□□□□ -1.37
ZNF540-201ENST00000316433 NIM1KQ8IY84 436 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 IL17RCQ8NAC3 791 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 DNAJB8Q8NHS0 232 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 PPTC7Q8NI37 304 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 RHEBL1Q8TAI7 183 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 EXOSC8Q96B26 276 aaKnown RBP6.46□□□□□ -1.37
ZNF540-201ENST00000316433 C19orf60Q96EN9 201 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 HPDLQ96IR7 371 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ACOX2Q99424 681 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 TBCDQ9BTW9 1192 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 MED18Q9BUE0 208 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 SLC25A23Q9BV35 468 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM54Q9BYV2 358 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 BTBD1Q9H0C5 482 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ZNF768Q9H5H4 540 aaKnown RBP6.46□□□□□ -1.37
ZNF540-201ENST00000316433 NMRAL1Q9HBL8 299 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 EML4Q9HC35 981 aaKnown RBP6.46□□□□□ -1.37
ZNF540-201ENST00000316433 KLHL11Q9NVR0 708 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 ASIC5Q9NY37 505 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 MIOXQ9UGB7 285 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 CDYLQ9Y232 598 aa6.46□□□□□ -1.37
ZNF540-201ENST00000316433 A0A1W2PPL8 197 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SLC12A8A0AV02 714 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SDHDO14521 159 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TIE1P35590 1138 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 LIPAP38571 399 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 EIF2S3P41091 472 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ALDH9A1P49189 494 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 RAB25P57735 213 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 HSF2Q03933 536 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CSTF1Q05048 431 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 IL18R1Q13478 541 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 DAG1Q14118 895 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 GPR19Q15760 415 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 PTCHD3Q3KNS1 767 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 NAPEPLDQ6IQ20 393 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SHQ1Q6PI26 577 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SMIM5Q71RC9 77 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF431Q8TF32 576 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SFT2D1Q8WV19 159 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 AURKBQ96GD4 344 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MYO19Q96H55 970 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 SORCS2Q96PQ0 1159 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 OR5M11Q96RB7 305 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 KCNH6Q9H252 994 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CLEC4MQ9H2X3 399 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MCUBQ9NWR8 336 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 LYARQ9NX58 379 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ERAP1Q9NZ08 941 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF638Q14966 1978 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MYO16Q9Y6X6 1858 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 DOCK4Q8N1I0 1966 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 MBLAC1A4D2B0 266 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 TUBAL3A6NHL2 446 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ZNF729A6NN14 1252 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 WASHC1A8K0Z3 465 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 FGF10O15520 208 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 AIREO43918 545 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ERN1O75460 977 aaKnown RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CBX7O95931 251 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ADH1CP00326 375 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 IGHA2P01877 340 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 DNTTP04053 509 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CYBBP04839 570 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CYP17A1P05093 508 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 FBP1P09467 338 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 COX5BP10606 129 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 ATP5F1P24539 256 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 PBLDP30039 288 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CD6P30203 668 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 CA5AP35218 305 aa6.46□□□□□ -1.38
ZNF540-201ENST00000316433 FGL1Q08830 312 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms