RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 FAM3CQ92520 227 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 CIDECQ96AQ7 238 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 FOPNLQ96NB1 174 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 FERD3LQ96RJ6 166 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ALG2Q9H553 416 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 UBE2ZQ9H832 354 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SNX13Q9Y5W8 968 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 A0A1W2PPV9 198 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 A0A1W2PS29 197 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PIPSLA2A3N6 862 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 FAM234BA2RU67 622 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 C4orf51C9J302 202 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 EEDO75530 441 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 NUDT7P0C024 238 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 UBTFL6P0CB48 400 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PIM1P11309 404 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 IST1P53990 364 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 RPS21P63220 83 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SP140Q13342 867 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 LAPTM5Q13571 262 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 RBBP5Q15291 538 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 UGT8Q16880 541 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PDCD4Q53EL6 469 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ZNF385BQ569K4 471 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 GCNT7Q6ZNI0 430 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 MTSS1LQ765P7 747 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ADCK2Q7Z695 626 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM73Q86UV7 250 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 HORMAD1Q86X24 394 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 FBXL6Q8N531 539 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 DTWD1Q8N5C7 304 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SLC13A3Q8WWT9 602 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 DNAJC9Q8WXX5 260 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SNX19Q92543 992 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SH3KBP1Q96B97 665 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 APOOQ9BUR5 198 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SOX17Q9H6I2 414 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 LTB4R2Q9NPC1 389 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ACSL6Q9UKU0 697 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PRPF19Q9UMS4 504 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 DENND4AQ7Z401 1863 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 LIN7AO14910 233 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SLC22A2O15244 555 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SNUPNO95149 360 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 NFKBIAP25963 317 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ADSLP30566 484 aaPredicted RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 TNFRSF4P43489 277 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PPP1CAP62136 330 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 CDKL1Q00532 357 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 NKG7Q16617 165 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ICE2Q659A1 982 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 HM13Q8TCT9 377 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 MAL2Q969L2 176 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ASB9Q96DX5 294 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 F2RL3Q96RI0 385 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SLC29A1Q99808 456 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 CIB1Q99828 191 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 THUMPD3Q9BV44 507 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 REXO4Q9GZR2 422 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 AICDAQ9GZX7 198 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 BTBD1Q9H0C5 482 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 KPNA5O15131 536 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PEX1O43933 1283 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 NTRK1P04629 796 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ACADMP11310 421 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 VHLP40337 213 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ATP4BP51164 291 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 AGERQ15109 404 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SDE2Q6IQ49 451 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 TLDC1Q6P9B6 456 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ZNF765Q7L2R6 523 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ZNF438Q7Z4V0 828 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 ICA1LQ8NDH6 482 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 DOK4Q8TEW6 326 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 RSRC1Q96IZ7 334 aaKnown RBP6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 PPP3R2Q96LZ3 170 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 CLMPQ9H6B4 373 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 LMCD1Q9NZU5 365 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 STOML1Q9UBI4 398 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 VPS29Q9UBQ0 182 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 RIMS3Q9UJD0 308 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 SNX6Q9UNH7 406 aa6.74□□□□□ -1.33
LYSMD3-201ENST00000315948 GNG14A0A1W2PPG7 69 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 KRBA1A5PL33 1030 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 GLOD5A6NK44 160 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 SAC3D1A6NKF1 404 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 RASGRP1O95267 797 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 CPSF4O95639 269 aaKnown RBP6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 KLK1P06870 262 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 PTPN6P29350 595 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 PEBP1P30086 187 aaKnown RBP6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 BMP8BP34820 402 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 CTBSQ01459 385 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 MAPKAPK3Q16644 382 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 CAPN13Q6MZZ7 669 aaPredicted RBP6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 ENPP6Q6UWR7 440 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 HID1Q8IV36 788 aa6.73□□□□□ -1.33
LYSMD3-201ENST00000315948 PCYOX1LQ8NBM8 494 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms