RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 UGT1A5P35504 534 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 CCR2P41597 374 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GALK1P51570 392 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 DGKQP52824 942 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TJAP1Q5JTD0 557 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 COLEC12Q5KU26 742 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TPGS2Q68CL5 300 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 APCDD1Q8J025 514 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZBTB8BQ8NAP8 495 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GPR32P1Q8NGA4 272 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 CLDN23Q96B33 292 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 LRRC3BQ96PB8 259 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 P2RY13Q9BPV8 354 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TRAF4Q9BUZ4 470 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZCCHC4Q9H5U6 513 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 PARVBQ9HBI1 364 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 KLQ9UEF7 1012 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 LEF1Q9UJU2 399 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 LYVE1Q9Y5Y7 322 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZAR1LA6NP61 321 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 BOLA2-SMG1P6H3BVE0 249 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 K7ERQ8 282 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ADAM10O14672 748 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TFPIP10646 304 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 CD37P11049 281 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TTKP33981 857 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 CRYBB2P43320 205 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 RPS24P62847 133 aaKnown RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 YWHAHQ04917 246 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 DLX2Q07687 328 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GTF2H2Q13888 395 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 NPTX1Q15818 432 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GPR107Q5VW38 600 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SLX4IPQ5VYV7 408 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GTF2H2CQ6P1K8 395 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 UBE3DQ7Z6J8 389 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 NR2C2APQ86WQ0 139 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 GLB1L3Q8NCI6 653 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 MID1IP1Q9NPA3 183 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TYW5A2RUC4 315 aaKnown RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 MITFO75030 526 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SRP72O76094 671 aaKnown RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 PGRP06401 933 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 IL7RP16871 459 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 IDSP22304 550 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 HNF1BP35680 557 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 RXRGP48443 463 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 MTPNP58546 118 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ANKS6Q68DC2 871 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 OTOP2Q7RTS6 562 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SLC46A3Q7Z3Q1 461 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 TMCO2Q7Z6W1 182 aaPredicted RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF554Q86TJ5 538 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 NKAPQ8N5F7 415 aaKnown RBP7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ATAD1Q8NBU5 361 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 RAB2BQ8WUD1 216 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 APIPQ96GX9 242 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 ITCHQ96J02 903 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 CTRCQ99895 268 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SPATA9Q9BWV2 254 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 RLIMQ9NVW2 624 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 MARK1Q9P0L2 795 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 VPS51Q9UID3 782 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 BTNL2Q9UIR0 455 aa7.56□□□□□ -1.2
CNOT4-201ENST00000315544 SLC16A5O15375 505 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 LINC01565O15544 149 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CREG1O75629 220 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 MPC1LP0DKB6 136 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 FXYD6P3P58550 94 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 STARD6P59095 220 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CACNG1Q06432 222 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 FCHO2Q0JRZ9 810 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 GPR50Q13585 617 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 RBBP5Q15291 538 aaKnown RBP7.55□□□□□ -1.2
CNOT4-201ENST00000315544 TBCEQ15813 527 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-201ENST00000315544 PROX2Q3B8N5 592 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 FUT11Q495W5 492 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 TCEAL5Q5H9L2 206 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ADGRF1Q5T601 910 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 PLPP4Q5VZY2 271 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CEACAM20Q6UY09 585 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 TPGS1Q6ZTW0 290 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 PDZD4Q76G19 769 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 HCAR2Q8TDS4 363 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 NXPE3Q969Y0 559 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 TMA16Q96EY4 203 aaKnown RBP7.55□□□□□ -1.2
CNOT4-201ENST00000315544 COX14Q96I36 57 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SIK2Q9H0K1 926 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ACER3Q9NUN7 267 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 KRT87PA6NCN2 255 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 XYLBO75191 536 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CD72P21854 359 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 MESP2Q0VG99 397 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 BNIP3Q12983 259 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms