RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CDKN2DP55273 166 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 E2F2Q14209 437 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 PAAF1Q9BRP4 392 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 TM9SF3Q9HD45 589 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ADAMTS5Q9UNA0 930 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 MYOCOSA0A1B0GUC4 107 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 INMTO95050 263 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
SPAST-201ENST00000315285 ACP5P13686 325 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
SPAST-201ENST00000315285 S100A1P23297 94 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 CSTF2P33240 577 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPAST-201ENST00000315285 MPIP34949 423 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 TGFBR2P37173 567 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 AVPR1BP47901 424 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 SP140Q13342 867 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 NFATC2Q13469 925 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 TUBA3CQ13748 450 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 LAPTM4AQ15012 233 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 MAMDC4Q6UXC1 1216 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 UBE2J2Q8N2K1 259 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 NFKBIDQ8NI38 313 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 RGMAQ96B86 450 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 HSPBAP1Q96EW2 488 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ELL3Q9HB65 397 aaPredicted RBP13.4□□□□□ -0.26
SPAST-201ENST00000315285 NEK6Q9HC98 313 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 RWDD3Q9Y3V2 267 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 PTGDR2Q9Y5Y4 395 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 XKRYO14609 159 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ZNF623O75123 536 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 SNAP29O95721 258 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 BCHEP06276 602 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 T-ENOLP0DO92 83 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ACRP10323 421 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 PPIGQ13427 754 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPAST-201ENST00000315285 FBXO43Q4G163 708 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 TNFAIP8L3Q5GJ75 292 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ARFGAP1Q8N6T3 406 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 OR8J3Q8NGG0 315 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 RDH12Q96NR8 316 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 MUS81Q96NY9 551 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 YIPF4Q9BSR8 244 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 COMMD3Q9UBI1 195 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 B4GALT6Q9UBX8 382 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 INSL5Q9Y5Q6 135 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 COCHO43405 550 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 ARSDP51689 593 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 IRAK1BP1Q5VVH5 260 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 HERVK_113Q902F9 699 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 IFT27Q9BW83 186 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 WDR26Q9H7D7 661 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 ADAP2Q9NPF8 381 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 AIG1Q9NVV5 245 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 POP7O75817 140 aaKnown RBP13.39□□□□□ -0.27
SPAST-201ENST00000315285 MATN4O95460 622 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 GKP32189 559 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 FRRS1Q6ZNA5 592 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 GFM1Q96RP9 751 aaKnown RBP13.39□□□□□ -0.27
SPAST-201ENST00000315285 MED28Q9H204 178 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 MARCH7Q9H992 704 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 TAC3Q9UHF0 121 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 DUXAA6NLW8 204 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 B3GALT2O43825 422 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 CLPXO76031 633 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 GJB5O95377 273 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 PRMT2P55345 433 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 MOGQ16653 247 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 KIAA1614Q5VZ46 1190 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 TMLHEQ9NVH6 421 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 HTR1EP28566 365 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 GHRHRQ02643 423 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 LRRC32Q14392 662 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
SPAST-201ENST00000315285 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 ZNF420Q8TAQ5 688 aaPredicted RBP13.39□□□□□ -0.27
SPAST-201ENST00000315285 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 TRMT61BQ9BVS5 477 aaKnown RBP13.39□□□□□ -0.27
SPAST-201ENST00000315285 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 MALT1Q9UDY8 824 aa13.39□□□□□ -0.27
SPAST-201ENST00000315285 H0YAE9 185 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PTGESO14684 152 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 DFNA5O60443 496 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 SOCS5O75159 536 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 RB1P06400 928 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 PABPC4LP0CB38 370 aaKnown RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 SEC13P55735 322 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 TAS2R50P59544 299 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 RPS13P62277 151 aaKnown RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 PPP2R2BQ00005 443 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 SNAP47Q5SQN1 464 aa13.38□□□□□ -0.27
SPAST-201ENST00000315285 OGFRL1Q5TC84 451 aaPredicted RBP13.38□□□□□ -0.27
SPAST-201ENST00000315285 MMAAQ8IVH4 418 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms